Penaeus chinensis (fleshy prawn): 125046852
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Entry
125046852 CDS
T08118
Name
(RefSeq) cytoplasmic FMR1-interacting protein-like isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125046852
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125046852
Factors involved in mRNA localization
Other mRNA localization factors
125046852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
SLED
Motif
Other DBs
NCBI-GeneID:
125046852
NCBI-ProteinID:
XP_047500802
LinkDB
All DBs
Position
39:complement(21076489..21125297)
Genome browser
AA seq
1538 aa
AA seq
DB search
MTCPPSRRLRRLLRTTSKRLFLLQTTTWTVRLLRRPRRSSTRVRGAETPRASLADMGQRA
SSRESDTASLSSRRSTWSSTSQKRATPRPPSRQSMVSTPSVGERRGSGAPVLQRQVSSAS
MAAYTQPFMLTEEAQGSSSLYGTMSKAARRAAKTQQQPHHSAEAYGTIRRGNAGMNRFDL
HDHKSGSSSSRDVRNVQWNELGRSSRSSLHSVSNGSQMTLSGSDLAPIPQEETGQHDFLT
RLKPVPRLVSEEGVGMAGERVTITDALSNVDVLDDLPLPDQQPVIEAQACSVVYTANFDT
NFEDRMAYVTGVAKYMEEAATHAELNKLLEEGENHAVMLYTWRCCSRAIPQPKSNEQPNR
VEIYEKTVKVLSDEVKKLTKFMNFQRKAIDVFCNQIKRLCHQEKRKDFVSEAYLLTLGKF
INMFAVLDELKNMKSSVKNDYSTYRRAAQFLKVMSDTQSLQESQNLSMFLATQNKIRDTL
KEKLTAIPSYEDLLCDVVNISVHMFENRMYLTPKEKQMLVKVMGFGLFLIDSDICNINKL
DQKKKIKLDKIDKIFKNLEVVPLFGDMQIAPFNYIKRSKNFDAKMWPLCSASTTSPQADL
MCHLPRIRDEHIKYISELARYSNEVITTYKETARTDAENKDIADLALRGLQLLSEWTSVV
TELYSWKLLHPTDHHSNNQCPADAEEYERATRYNYTDEEKFALIEVIAMIKGLQVLMARM
ETVFLDSIRRNIYQEMQDFVQLTLRDPLRKAIKNKKELLRTILVSVRETSADWVKGMEPP
DDPALKGKKDPDNGFEIKVLRRNVGPSSTQLYMVRTMLESLISDKSGGKKTLRKELDGQH
LCQIDEFHKTSFFWTYLLNFSETLQFCCDLSQLWYREFYLEMTMGRRIQKCTVEHHHNEE
CKDLVVMDKRIQFPIEMSMPWILTDHILRTKDASMMECVLYPLDLYNDSAYYALTQFRKQ
FLYDEIEAEVNLCFDQFVFKLSEQIFAYYKHLAGSILLDKRFRSECSLHNMRIHYPPANR
YDTLLKQRHVQLLGRSIDLNKLICQRINSSMHKSLEVAIARFEGADITSVVELEGLIEVN
KLTHKLLSQLLVLDDFDAQLREANHNVLAPYGRTTLHVFWELNYDFLPNYCYNAATNRFV
KAPVTTFAQPVQRDKPPNVAPYMVWGSKALNVAFNTIYSQFSGFLGPPHLRSIVRVLGYQ
GIAVVMQELLEIIHSLIQGNIHQFTKTLLQAMPKQCKLPRYDYGSPGVLGYYHAQLNDIV
QYPDARTDLFHHFRELGNALLFCLLVEQSLTQEEVCDLLQAAPFQNILPRPFCKEGEKPE
TKQKRLEAKYAPLQIVSNIERLGTAKQAMIAREGDLLTRERLCCGLSIFEVILTRIQTFL
EDPIWHGSPPANGVMNVDECTEFHRLWSALQFVMCIPVGANNFTVEQLFGEGLNWAGCCM
IVLLGQQRRFEALDFCYHVLRVQKVDGKDEAVKGIQLKRMCDRIRRFQVLNSQIFAVLNK
YLKTSDPDNLPVEHVRCFQPPIHQSLANQTYQRPDHLR
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atgacatgtccgccctcccgccgcctccgccgcctcctgcggacgacttccaagcgcctc
ttcctcctccagactacgacctggacagtgcgcctcctccgccgcccccggaggtcctct
acgagagtgcggggagcggagacccccagggcctcgctggcggacatggggcagcgggcc
agctcgcgcgagtccgacacggcgagcctctccagccgcaggtccacatggtcctcgacg
agccagaagagggctaccccgcgccccccttcgcgccagagcatggtcagcacaccttcc
gtcggtgagcgcagagggtctggcgcacccgtcctacagcgccaggtatcctcggcttcg
atggcagcctacacgcagccgttcatgctgacggaggaagcccagggctcctcttctctg
tacggcacgatgagcaaggcggcgcggagggcagccaagacgcagcagcagccccatcac
tctgctgaggcgtacggtacaatccggcgcgggaatgcaggcatgaaccggttcgatttg
catgatcacaaaagtggttccagttcaagcagagacgtgaggaatgttcaatggaacgaa
ctaggaagatcgtccaggagcagcctgcattcggtctccaacggctctcagatgaccttg
tccgggagtgacctcgcgccgattccacaggaggagacgggccagcacgactttctcaca
agactcaagccggtgcccaggcttgtgagcgaggagggcgtcgggatggctggcgagcgc
gtgaccatcactgatgccctcagcaatgtcgacgtccttgatgacctgccgctgccagac
cagcagccggtcatcgaggcacaggcatgttcggttgtctatacggccaacttcgacacc
aacttcgaggaccgtatggcctacgtgacgggggtggccaagtacatggaggaagcagct
acccatgcagaattgaataaattactagaagagggtgaaaatcatgctgttatgctgtac
acttggcggtgctgttctcgtgccatcccccaaccaaagtcaaatgagcagccgaatcgt
gtggaaatttatgagaaaacggtgaaagtcctgtcggatgaagtaaagaagttgacaaag
tttatgaatttccagaggaaagccattgatgtattctgcaaccaaatcaagcgactctgt
caccaagagaagcgaaaggactttgtgtctgaagcctatcttctcacccttggcaaattc
atcaacatgtttgctgtccttgacgaattgaagaacatgaagtcgagtgtgaagaatgac
tactcaacttacagaagagctgcgcagtttctcaaggtgatgagcgatacccagtctcta
caggagtcacagaatctgtcaatgttcctggccacccagaacaagatcagggacactctc
aaggagaagctaacagcaattccttcatatgaggatcttctgtgtgatgttgtcaacatc
tcggtgcacatgtttgagaaccgcatgtacttgacaccaaaagaaaagcagatgctggtc
aaggtgatgggattcggtctcttcctcattgactcagacatttgtaacatcaataaactt
gaccagaagaagaagattaagttggacaagattgataaaatctttaagaacctagaggtc
gttccactgtttggcgacatgcagattgcacctttcaattacatcaagaggagcaagaac
tttgatgccaaaatgtggcctctatgcagtgcatcaaccacaagcccacaggcagacctg
atgtgccatttaccacgcattagggatgaacatatcaagtatatctcagagttagcaaga
tacagcaatgaggtcatcacaacatataaggaaacggcacgtacggatgcagagaacaaa
gacatagcagaccttgccctccgtggcctccagctcctcagtgaatggacaagtgttgtc
acggagctttattcatggaagctactgcaccccactgaccaccactccaataaccagtgc
ccagccgacgcagaagaatatgaaagggctacacgatacaattatactgatgaagaaaag
tttgcccttatcgaagtcattgcaatgattaaaggcctgcaagtcttaatggctcgcatg
gagactgtattcctagactcaatacgacgcaacatctaccaggagatgcaagatttcgtg
cagctcaccctaagggaccccttgcgtaaggccatcaagaacaagaaggaactcttgagg
acgatcttggtgtcagtacgtgagacaagtgccgactgggtgaagggaatggaaccccca
gatgacccagcactcaagggcaagaaggatccagacaatgggtttgagatcaaggtgcta
agaaggaatgttggcccttcctcaacacagttatatatggtacgcacaatgctagagtct
ctgatttcggacaagtcaggaggcaagaaaaccctacggaaggaactggatggccagcac
ctctgccagattgatgaattccacaagacctcctttttctggacatacttgttgaacttt
agtgaaacgctccagttttgctgtgacctttcccagctgtggtacagggagttctacttg
gagatgacaatgggtcgcaggatacagaagtgcactgtggagcaccatcacaatgaggaa
tgcaaagatctggtggtgatggacaagcgcattcagttccccattgagatgtccatgccg
tggatcctaactgaccacatcctgcgcaccaaagatgcgtcaatgatggaatgcgtcctc
taccctcttgacctgtacaacgacagcgcctactatgctctcacacagttccgcaagcag
tttctctatgatgaaattgaagcggaggttaacctctgctttgaccagtttgtcttcaaa
ttatcggaacagatctttgcctactataaacatctagctggcagcatcctacttgacaag
aggttcaggagtgagtgcagccttcacaacatgagaatccattacccaccagcaaatcgg
tatgacaccttgctgaagcagcgtcatgtgcaacttcttggccgcagtattgacctcaat
aagctcatctgtcagcgcataaattcatccatgcacaagtcccttgaagtggctattgct
cggtttgaaggggcagatatcacatctgttgtggaactggaaggactcattgaggtaaac
aaactcacacacaaactcttgagtcaattgctcgtattggacgacttcgatgcacaactg
agggaggcgaaccacaatgtccttgccccctatggcagaacaacgctccatgttttctgg
gaactcaactacgatttcttacccaactactgctacaacgcggccaccaatcggtttgta
aaggcacctgtaactacatttgcacagccagtacagagagacaagcctccaaatgtggca
ccatacatggtctggggtagcaaggccctaaatgtagctttcaacacaatttactcacag
ttttcaggcttccttggtcccccccacttgcggtccattgtccgagtgttggggtaccaa
ggtattgcagtggtgatgcaggagctccttgagatcatccactcactcatccagggaaac
atccaccaattcacaaagacattgctgcaggctatgcccaagcagtgcaagcttcctaga
tatgattatggatccccaggtgtacttggctattaccatgcccagcttaatgacatcgtg
cagtatcctgatgcccgcacagacctcttccatcacttccgagagttgggcaatgctctt
cttttctgcctgttggtagagcaatcactcactcaagaagaagtttgtgatttgctgcaa
gctgcaccgttccagaatattttgccgcgccccttctgcaaagagggtgagaagccagag
acaaaacagaagcgtttagaggcaaaatatgctccattacagattgtctccaacattgag
aggcttggaacagcaaagcaagccatgattgcacgagaaggtgacttattgacaagagag
cgcctttgctgtggcttgtcaatctttgaggttattttgacacgaatacagaccttcttg
gaagaccccatatggcatggttccccacccgcaaatggtgtaatgaatgtagatgaatgc
acagagttccaccgcctgtggtctgcactccagtttgtcatgtgcatacccgtaggagct
aataacttcactgttgaacaactcttcggtgaggggctcaactgggctgggtgctgtatg
attgtccttctggggcagcagcgaaggtttgaggcgcttgacttctgttaccatgtcctt
cgggtgcaaaaggtggacggaaaggatgaggctgttaaaggaattcaattgaagaggatg
tgtgatcgcatccggcggttccaggtgcttaactctcaaatcttcgctgttctgaacaaa
tacctgaagacaagtgaccctgataacctcccagtggaacacgtgcgatgcttccagcca
cctatccaccagagcctggctaaccagacataccaacgaccggaccacttacgctag
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integrated database retrieval system
