Penaeus chinensis (fleshy prawn): 125047023
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Entry
125047023 CDS
T08118
Name
(RefSeq) ran GTPase-activating protein 1-like
KO
K14319
Ran GTPase-activating protein 1
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125047023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125047023
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
125047023
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
LRR_4
CobT
BUD22
Trypan_PARP
Paf1
Sigma70_ner
RRN3
DNA_gyraseB
Tim54
Nop14
PI3K_1B_p101
RNA_pol_Rpc4
Motif
Other DBs
NCBI-GeneID:
125047023
NCBI-ProteinID:
XP_047501004
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Position
40:complement(25612644..25625439)
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AA seq
569 aa
AA seq
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MESTLSFAGQNNKWNTAEDVKAAAEAIRNHQDLRCLVLEANTLGVEAAKVMGDALATHPE
FERAHWKDLFTGRLKTEIPEALRHLFSGLIRAGAKLKELDLSDNALGPVGVEGMVDFMSS
PVCYSLQELRLNNNGLGIKGGTMLAESLMRLVDNAKAAGTPLTLKVFIAGRNRLEKEGAK
VYAKFFKAVGTLEHVAMPQNGIFHEGIAALADAFSTNNNLRVVNLNDNTFTPKGAQAMAD
KLPMMQNLEVINFGDCLIKTAGAKMIAKALTSGHKNLRELFLDSNEINIKGGLAIAEAMA
DKENLDKLMLDCNQFGEDGREMLISLLNDLGQLEALDSLEDDEDPDSEEEEDDDDDEDEE
DEDEDEDEDEDEEEEEDEEEVTQVPGSGVSPLKHVESVVSPVKCTVEEFCEQPTAARLLG
LGNSGPSQLVEEAKRLAEGSEEAFINFCLKIFMRTGSIATTNNVEVQTAVNAATEQLAKA
AFTAAQKSDSLSLATNSLLVHLGLIKCEDKKFKLEWDLKGCLIVLAMIVSSPLFPEQTKS
TLQLFLSKPNPKIDVYTQEKHKLMVALFQ
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcacgctgagcttcgccgggcagaataacaagtggaacacagctgaagatgtg
aaggcagcagcagaagccattcgcaaccaccaggacttgcgatgtctggttcttgaggcc
aatacgcttggtgtagaggcagccaaggtgatgggagatgcgctagccacgcatccagag
tttgagcgagcgcactggaaggatctgtttactggtcgtttgaagactgagattcctgaa
gcactgcgccacctgttctctggcctgatacgcgccggtgccaagctgaaggagctagac
ctgagtgacaacgctcttggccctgtgggtgtggagggcatggtggacttcatgtcatcc
cctgtctgctattccctgcaggagctgagactgaacaacaatggactcggcatcaaggga
ggtactatgcttgccgagtctcttatgaggctggtggataatgcaaaagctgctggaact
ccactaactcttaaggtatttatagctggtcgcaacaggcttgagaaagaaggtgctaag
gtttatgccaagttcttcaaggctgttggcactctggaacacgtcgccatgcctcagaat
ggcatcttccatgaggggattgcagcacttgcagatgctttcagtaccaacaacaacctc
cgggtagttaacctcaatgacaacacatttacccccaagggtgctcaggcgatggcagac
aaattgccaatgatgcagaacttagaagtgatcaattttggagattgcctcattaaaaca
gcaggagccaagatgattgccaaagccttaacttcaggacacaagaatctgagggagctg
ttcttggacagtaacgagattaacatcaaaggtggattggcaatagctgaagccatggca
gataaagagaacttggacaagctcatgctggactgcaatcagtttggtgaggacggacgg
gaaatgctcattagtcttttgaacgacttgggtcaattggaggcccttgactcccttgag
gatgatgaggatccagacagtgaggaagaggaagatgatgatgatgatgaggacgaagag
gatgaggatgaggatgaggatgaagatgaggatgaagaagaagaagaagatgaagaggag
gttacacaggtccctggatctggagtgagccctctgaagcatgtggagtctgttgtcagt
cctgttaagtgtactgtagaggagttttgtgagcagccaacagctgccagacttcttggt
ttggggaactctggtccttctcagttggttgaagaagctaaaagattggcagaaggaagt
gaagaagcctttatcaacttctgcttgaagatcttcatgcgaactggatcgattgccaca
actaacaatgtagaggttcagacagcggtaaatgctgccacagaacagctggctaaggca
gcatttacagcagcccagaaaagtgattcactctcccttgcaacaaacagtcttttggta
catttaggactcattaaatgtgaggataagaagttcaaattagaatgggaccttaaagga
tgcctgattgtcttggctatgattgtgtcgtcaccccttttcccagagcagacaaagagc
acgttgcagcttttcctgtccaaacctaacccgaagattgatgtctatactcaggagaaa
cacaaacttatggtagcgctctttcaatga
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