Penaeus chinensis (fleshy prawn): 125047057
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Entry
125047057 CDS
T08118
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn04145
Phagosome
pchn04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125047057
09142 Cell motility
04814 Motor proteins
125047057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pchn03036
]
125047057
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pchn04812
]
125047057
Chromosome and associated proteins [BR:
pchn03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
125047057
Cytoskeleton proteins [BR:
pchn04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
125047057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WDR55
WD40
Dynein_IC2
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_NUP159_NUP214
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_IP5PC_F
Beta-prop_SPT8
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
125047057
NCBI-ProteinID:
XP_047501063
LinkDB
All DBs
Position
40:complement(3034432..3080303)
Genome browser
AA seq
737 aa
AA seq
DB search
MMSQGVGISAMDRLRVDSPDRKTMWKEEKERKLAKLKQLRAEREKRRRDQLSREAQEAAV
RASNAPRDDQQDLDKMLSSLGVAPVSDKDKDKSSGPIEETRSTNPPVEEPSATKSGQTEV
LSSMSSMSSEPGQDLTGSPDKSLEGNATASPRTPSKRPPQLSVVSVQATNIPPRETVTYT
KGVQTSSSGDGHGDGILAQIRSKYHNMHEYNLNPALEWDDEFTVLTYDDPQAEEEDNSLT
MLDTPPMFGGGHNRHLPPGILPTGMPQVQDVKPALATEAEKKVEEEKPKPPRELSDEEKQ
MLMMTEEFHSFFDHSTRIIERALAEDANIFADYSHDHEEDGEANENGGVKLSLNRWFYDE
RWSRNRCITCMDWSPQYPELLVASYNNNEDSPHDPDGVALVWNTKFKKETPEYIFHCQSP
VMSATFARFHPNLIIGGTYSGQIVLWDNRSQKRTPVQRSPLSASAHTHPVYCMKVVGTQN
AHNLISASTDGKMCSWSLDMLSQPQESMELQHKQSRAVAVTSLAFPHGDVNNFIVGSEEG
AVFTACRHGSKAGIVDAYEGHQGPVTGVSTHATLGPIDFSHLFLTSSIDWTVKLWSVKET
KPLYSFEDNGDYVYDVAWSPIHPALFTAVDGSGRIDLWNLNQDTEVPTASTYVDGNPALN
RVSWTNSGQQITVGDDMGKIWIYDVGEQLALPRADEWARLVHTMGELKNNQADDDQSTRH
YDSSFSSLTSLASSPLR
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcacaaggcgttggtataagcgcaatggatcgtctgcgtgtagattcaccggat
cgaaaaaccatgtggaaggaagaaaaagagcgtaagcttgccaaactgaagcagctgcgc
gcagagagagagaaacgacgaagagaccaactgtctagagaggctcaggaagcagctgta
cgtgcgagcaatgcaccgcgagatgaccagcaggatttggataagatgctctcctccctg
ggggtggcacctgtctcggataaagataaagataaaagcagtggtcctattgaggaaact
agaagcactaatccgcctgtagaagaaccatctgcaaccaagtctggtcagacagaggtc
ctgtcgagtatgtcgagcatgtcctccgagccggggcaagacctaacgggttcgccagac
aagagtctagaagggaatgctaccgcttcaccaagaacaccgagcaagaggcctccacag
ctctcagtcgtaagtgtacaggcaaccaacatccctcctcgtgaaacggtgacttacact
aaaggggtgcagacctcatcgtcgggtgatggccacggagatggaatcttagctcaaatt
cgatctaaataccacaatatgcacgaatataatctaaacccagcgctagaatgggatgat
gaattcacagttcttacttacgatgacccgcaagctgaggaggaggacaactccttgacc
atgcttgacaccccaccgatgttcggaggaggccacaaccgccaccttccgcccgggatt
ctccccacgggtatgccgcaggtgcaggacgtcaagccggccctcgccaccgaagccgag
aagaaggtcgaggaggagaagcccaagccaccccgtgagctgtcggatgaagagaagcag
atgctgatgatgacggaggagtttcacagcttctttgaccactcgactcgtataattgag
cgagcccttgcggaggacgccaacatctttgcagattactcgcatgaccacgaagaggat
ggtgaagcaaatgagaatggaggtgtcaagttgtctctgaatcgctggttctatgacgaa
cgatggtcgcgtaaccgctgcatcacttgcatggactggtctcctcaatacccagaactt
ctagttgccagctacaacaacaatgaggactcccctcatgaccctgatggtgttgccctt
gtatggaataccaaatttaagaaagaaacacctgagtatatcttccattgtcagtctcct
gtgatgtctgcaacttttgcaaggtttcatcccaatttgataattggtggaacatattct
ggacaaattgttctctgggacaaccgtagccaaaagagaactccagtccaacgtagtccc
ctgtctgcttcagctcatacacatcctgtgtactgcatgaaggtggttggcactcaaaat
gcccacaatcttatcagtgcaagtactgatggaaagatgtgttcctggtccttggatatg
ctttcacagcctcaggaatcaatggagctccagcacaagcagtcacgtgcagtagcagtc
acatctttagccttccctcacggagatgtcaacaactttattgtgggttctgaagaagga
gctgtatttactgcttgccgtcacggaagtaaagctggtatagtggatgcctatgaggga
catcagggcccagtgactggggtgagcactcatgctaccctgggacccattgacttctct
catctcttcctcacttcatcgattgactggacagtcaagctttggtctgttaaggaaacg
aagcctctatactcatttgaggacaacggtgactatgtatatgatgtggcttggtcaccc
atccaccctgctctcttcacggccgtggatgggtcaggaaggattgacctctggaatcta
aaccaggacacagaggttcctacagcaagtacatatgtagatggtaacccagcactgaat
agagtgtcctggactaactctggtcaacagatcacagttggtgacgatatgggtaaaatc
tggatctatgatgtaggcgaacaacttgcacttccacgtgcagatgaatgggctcggttg
gtgcacaccatgggagagctaaagaacaaccaagcagatgatgaccaatccactaggcac
tacgattcctcgttctcttccctaacctcattagcgtcttcccctctcagataa
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