Penaeus chinensis (fleshy prawn): 125047078
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Entry
125047078 CDS
T08118
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 35-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125047078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pchn04131
]
125047078
Membrane trafficking [BR:
pchn04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
125047078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
125047078
NCBI-ProteinID:
XP_047501131
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All DBs
Position
40:22844739..22874426
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AA seq
804 aa
AA seq
DB search
MEGETDNMVSPMDEQDKLLDEAMGAVRGQAFQMKRCLDKGRLMDGLKHASNMLGELRTSL
LSPKTYYELYMCICDELRHLEMYLIDEFQKGHRVADLYELVQYAGNIVPRLYLLITVGLV
YIKTNETCKRDILKDLVEMCRGVQHPLRGLFLRNYLLQCSRNILPDSEDPPVGHNPEEFP
GGSISDSVDFILMNFAEMNKLWVRMQHQGHSRDKEKRERERQELRILVGTNLVRLSQLEH
VDVERYKKSVLPGILEQAVSCRDPLSQEYLMECIIQVFPDEFHLQTLSAFLKACAELHSE
VNVKNIIISLIDRLANFAHREDGTGIPDEIKLFEIFSEQVSQVIKSRPDMPMEDTVSLQV
SLVNLAQKCYPDEIEYVDKVMQNTLEVFQKLNIDKIHSGSALGKELSRLLRLPADNYNNL
LTVLQLQYYTPLLNLLDYSGRKILSTYLVTNAVDNETCIPTQEQVDAVLSMIASLICDQS
DQPLVDPDPEDLAEEQGLLARFLHLFKSTNSDQQYLILTTARKHLGAGGNKRVLYTLPPL
VFQAYQLAFKYHAXKSQDDKWSKKVHKIFQFSHQTITALVKAEYAELPLRLFLQGALAID
KIDFENHETVAYEFMSQAFSLYEDEISDSKAQLAAMTLIMGTFQQTTCFSEENHEPLRTQ
CALAASKLLKKPDQARGVTTCSHLFWSARSLATNKEELRDEKRVLECLKKAVRIANQCMD
PSAQIQLFVELLNHYIYFYEKGNTQVTVAMLNQLISKVKEDLANLETTEDTDQISRHLTN
TLTHLQLRLQEPPSDGPNYEGLQL
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaaacagataacatggtttctccaatggatgagcaggataagctcctggat
gaggccatgggtgctgtccggggacaggctttccagatgaagaggtgtttagacaagggc
cgcctcatggatggattgaaacatgcttcaaacatgctgggtgaacttagaacatctttg
ctgtctcccaagacttattatgaattatatatgtgcatttgtgatgaacttcggcatttg
gaaatgtacctaattgatgagttccagaagggtcaccgagtggcagatctatatgaacta
gtccagtatgcaggaaatattgtaccacgactatacttgctgatcacagttggactggtg
tacatcaagactaatgaaacatgcaagcgagacattctgaaggacctggtggagatgtgc
cgaggagtccagcatcctctgcgtggtctcttcctgaggaactaccttcttcagtgtagc
aggaacattctgcctgattcagaagaccctccagttggacataacccagaggagttccct
ggaggatctatatcagacagtgtagatttcattttgatgaactttgcggagatgaacaag
ctgtgggtaaggatgcagcatcagggacattcacgagacaaagagaaaagggaacgagag
agacaggagttgcgtatcttagtgggaaccaatctggttcgtctgtctcagctggagcat
gttgatgtagagaggtataaaaagagtgttttgcctggaattttggagcaggctgtaagt
tgcagagaccctctttctcaggaatatctaatggaatgcataattcaggtgttcccggat
gagttccatttacagacactaagtgcttttctgaaggcatgtgctgagcttcactctgag
gtcaatgtcaagaatattataatttctctcattgaccgacttgccaactttgctcaccgg
gaggatggcacaggcattccagatgagatcaagttgtttgaaatcttctccgaacaggtc
tcacaagttatcaagtctcgtcctgatatgccaatggaagatacagtcagtcttcaagtg
tctttagttaacttggcacagaaatgctaccctgatgagatagagtatgttgataaagtc
atgcagaatactcttgaagttttccagaagctaaacattgacaagatccactctgggtct
gcacttggaaaagaactgagtcgtctcctgcgcttgccagctgacaattataacaacctt
ctcaccgttctgcagctgcaatactacacccccttactcaacctcctagattacagtggt
cgcaagatcttaagcacctatctggtgactaatgctgtggacaatgagacttgcatacca
acccaagaacaggttgatgccgtactttccatgattgcatccttgatctgtgaccagtct
gatcagcctttggtcgacccagaccctgaagatttggctgaggagcaagggttattggcc
agatttcttcatcttttcaagtccacaaacagtgaccagcaatatctgattttgacaact
gctcgtaaacatttaggagctggtggtaacaagagagttctgtatacactccctccgcta
gtgttccaggcttatcagttggctttcaagtatcatgcctgaaagagccaggatgataaa
tggagcaagaaggtacacaaaatcttccagttcagccatcagacaatcacagctttggtt
aaggcagagtatgcagagctaccgctgcgattgttcttacaaggtgctctcgcaatagac
aagatcgactttgaaaaccatgaaactgttgcctatgagtttatgtcgcaggctttttct
ctgtatgaggatgaaatcagtgacagcaaagctcaactggcagccatgactttgatcatg
ggcaccttccaacaaacgacttgcttcagtgaagaaaatcatgagcccctccgaacgcaa
tgtgctcttgcagcctcaaagttgctcaagaaacctgaccaagctcgaggtgtgactact
tgttctcacctattctggtcagcacgatccttagctaccaacaaggaggagttacgggat
gagaagagagtgctggagtgcttaaagaaagctgtgcgcattgctaaccagtgtatggat
ccttctgcacaaatccaactctttgttgaactcctcaatcactatatatacttttatgaa
aagggaaatactcaggtgacagttgctatgcttaatcagctgataagcaaggtgaaggag
gacctggccaacttagaaaccacggaagatacagaccagatttcaaggcacctgaccaac
accctgacacacttacagctcaggctacaagaaccccctagtgatggccccaattacgag
ggcttgcagctttaa
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