Penaeus chinensis (fleshy prawn): 125047091
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Entry
125047091 CDS
T08118
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125047091
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pchn01002
]
125047091
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pchn04121
]
125047091
03036 Chromosome and associated proteins [BR:
pchn03036
]
125047091
03400 DNA repair and recombination proteins [BR:
pchn03400
]
125047091
Peptidases and inhibitors [BR:
pchn01002
]
Metallo peptidases
Family M67
125047091
Ubiquitin system [BR:
pchn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
125047091
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
125047091
BRISC complex
125047091
Chromosome and associated proteins [BR:
pchn03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
125047091
DNA repair and recombination proteins [BR:
pchn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
125047091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
BRCC36_C
Prok-JAB
UPF0172
Zn_peptidase
Motif
Other DBs
NCBI-GeneID:
125047091
NCBI-ProteinID:
XP_047501152
LinkDB
All DBs
Position
40:complement(8380420..8388473)
Genome browser
AA seq
271 aa
AA seq
DB search
MWVSSVRLAADAYLVCLHHALTTEKEEVMGLLVGQFSEGNEVTCDIYSAVTLRRSDKRKD
RVEISPEMLIEAQNKAEQMSASSGQELHIVGWYHSHPHITVWPSDIDLQTQAGYQQMDSR
FIGLIFSVYNEDKKTKVGSHQVTCFQATNQSPEGEAPQYVRLPVPLEIQPTPNLAPNNQQ
ALESLCSTLFDEQSEVLELSRQRSPQYPLAHLHNAAVMVRSVCGLSSLVSGPLVCTMEER
LHHIRGTTQHLKQEAEYLKNLLLENEIKVPL
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtgtctagtgtaagactggctgctgatgcttaccttgtgtgtcttcatcatgcc
ctcacaacagagaaggaagaagtgatgggactgcttgtaggacagttcagtgagggcaac
gaagttacctgtgatatttattctgctgttacactgagaagatcagataaaagaaaggac
cgtgtggaaatatcacctgagatgctgattgaggcccagaacaaagccgagcaaatgtca
gcttccagtggacaggaactacacattgtgggctggtatcactctcacccacacatcact
gtttggccctctgatatagatttacaaacccaggcaggataccaacaaatggacagcaga
tttattggccttatattctcagtttacaatgaagacaagaaaaccaaggtaggaagccat
caggtaacctgcttccaagcaaccaaccagagtccagagggagaggcccctcagtacgtg
cgattacctgttcccctggaaattcagccgaccccaaatttagcccctaataaccaacag
gcactggagagcttgtgttcaacactctttgatgagcaaagtgaagtgctagagttgtca
agacagcggtctccccaatacccacttgctcatttacacaatgcagctgtgatggttcgc
agtgtttgtggccttagtagccttgtgtcaggtcctcttgtgtgcacgatggaggaacga
ttacaccacataagaggcactacgcaacatctaaaacaagaagcagagtacttaaagaac
ctccttctggaaaatgaaatcaaagttcctctttaa
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