Penaeus chinensis (fleshy prawn): 125047375
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Entry
125047375 CDS
T08118
Name
(RefSeq) protein HBS1-like isoform X3
KO
K14416
elongation factor 1 alpha-like protein
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125047375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125047375
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125047375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
MMR_HSR1
FeoB_N
Ras
SRPRB
Septin
Motif
Other DBs
NCBI-GeneID:
125047375
NCBI-ProteinID:
XP_047468567
LinkDB
All DBs
Position
1:complement(20256553..20274363)
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AA seq
678 aa
AA seq
DB search
MSRHRNYRNLDFEEEYDSYDEVLGHSVEDSECGMSPGMEQYLYSRSKDAAHGFASYLPTG
EDIKEEEEAVDETLHQPGSLDRSRHDSSTYEKPPLSTEDEVRLSSIMDELHNILGDQYSE
RELTQTIIANKFELEASLNALLNKGASAAAAVAQPFSNRAERGNAKGNDQTASAYVEQLS
LSRNADTNKSAPLQGKRTPASKAVGKLAATPVVVATPNKNGNTPRVVRGFDVLSNDEGAA
AENNLSINEQESKRSRSNTPVRGWRDKDKDKEKDRLKEKETPTVARTPAKIRDKAVDVEM
CYKQQRGGEKDLLNLVVVGHVDAGKSTLMGHLLYLQGNVGQRMMHKYEQESKKIGKQSFM
YAWVLDDTEEERSRGVTVDIAQRVFESDKKKITLLDAPGHKDFIPNMITGAARADVAILV
VDATTDAFEAGFESGGQTREHALLIRSLGMTQLAVAVNKLDTVNWSQERFMEIKTSLRHF
LKTVGFKDADVIYVPCSGLSGENLMKPSTIEALNSWYTGPTLLQAIGVQVENAEPSTAFA
GDPVTLTISGVDPNVLHVGDFLCDPSEPIPLAIRVQARIVLFNIKVPLIEGTQVDFHYQS
LTEPAKIRKLVSQVHKTTGQIVKKRPRALVNNSAGLIEIQFTRPLCLELFRDYKELGRFM
LRIRGATIAAGLVTQILN
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcacaggaactacaggaatcttgattttgaagaagaatatgactcctacgat
gaggtcttgggccattccgttgaggacagtgaatgtgggatgtctccaggaatggagcag
tacctctatagccgaagtaaggatgctgcccatgggtttgcatcttacttaccaactgga
gaagacatcaaggaggaggaggaggctgtagatgagacactacatcagcctggatcactg
gataggagcagacacgattcctccacttatgaaaagcctcccttgtcgacagaagatgag
gttcggttgtcatcgatcatggacgaacttcacaatattttaggagatcagtatagtgaa
agagaacttacacaaactatcattgcaaacaagtttgagctggaggcctcactgaatgca
ctcctaaataagggggcatcagctgcagctgcagttgcacagcctttcagtaacagggca
gaaaggggtaacgcgaaaggcaatgatcagacagcttccgcttatgtagagcagctctcc
ctgtcacgcaatgcagacacaaataaaagtgctcctttgcaaggcaagaggacaccagct
tcgaaagcagttggcaaattggctgcaactccagtggtagttgctacacccaataagaat
gggaatacacctagagtggtgcgagggtttgatgtgctcagcaatgatgaaggtgcagca
gcagagaacaacctgagcatcaatgagcaagagtccaagaggtcacgttcaaacacgcca
gtccgcgggtggcgggataaagacaaagataaagagaaggacagactcaaagagaaggaa
actccaaccgttgcaaggaccccagcaaagatccgagacaaggcagttgatgtggagatg
tgttacaagcagcagagaggaggagaaaaggacctacttaatctggtggttgtaggacat
gtggatgctggaaaatcaaccctaatgggacatctcttgtatcttcagggcaatgttggt
cagaggatgatgcacaaatatgagcaagagagcaagaaaataggaaaacagtctttcatg
tatgcttgggttttggatgacacagaggaagaaaggtctcgtggtgtcacagttgacata
gcacaaagggtgtttgagtcagataaaaagaaaatcactttgctggatgccccgggtcac
aaggacttcattcccaacatgatcactggagcagcaagggctgatgttgcaatcttagtt
gttgatgctaccacagatgcttttgaggctggctttgagagtggaggtcagactcgggag
catgctttgctgattcgatccttaggcatgacacagttagcggtagcagttaacaagctt
gatactgtcaactggagtcaagaacgtttcatggaaattaagactagcctccggcatttc
cttaaaactgttggcttcaaggatgcagatgtgatttatgtaccttgctcgggtttgtct
ggtgagaacttgatgaagccaagcacaattgaagctttaaactcctggtacactggtcct
actcttctgcaagctattggcgtccaggtggagaatgccgaaccctcaactgcatttgcg
ggtgaccccgtaacacttacaatctctggtgtagatccaaatgtgctacacgttggtgac
ttcctgtgtgatccttcagaacctattccacttgccataagggtgcaagcacggatagtt
ctctttaatattaaggtcccactaattgaaggaactcaggttgacttccattaccagtca
ctcacagaaccagccaaaatacgcaagttggtttcccaagtccacaagacaacgggacaa
attgttaagaaacggcctcgcgctctagtcaataattctgctggcttgatagagatccag
ttcactcggcctctctgtttagagctcttccgtgactataaagaactgggtcggttcatg
ctgaggattagaggagctacgatcgctgcaggactagttactcagatcctaaactaa
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