KEGG   Penaeus chinensis (fleshy prawn): 125047375
Entry
125047375         CDS       T08118                                 
Name
(RefSeq) protein HBS1-like isoform X3
  KO
K14416  elongation factor 1 alpha-like protein
Organism
pchn  Penaeus chinensis (fleshy prawn)
Pathway
pchn03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pchn00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    125047375
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pchn03019]
    125047375
Messenger RNA biogenesis [BR:pchn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     125047375
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 HBS1_N MMR_HSR1 FeoB_N Ras SRPRB Septin
Other DBs
NCBI-GeneID: 125047375
NCBI-ProteinID: XP_047468567
LinkDB
Position
1:complement(20256553..20274363)
AA seq 678 aa
MSRHRNYRNLDFEEEYDSYDEVLGHSVEDSECGMSPGMEQYLYSRSKDAAHGFASYLPTG
EDIKEEEEAVDETLHQPGSLDRSRHDSSTYEKPPLSTEDEVRLSSIMDELHNILGDQYSE
RELTQTIIANKFELEASLNALLNKGASAAAAVAQPFSNRAERGNAKGNDQTASAYVEQLS
LSRNADTNKSAPLQGKRTPASKAVGKLAATPVVVATPNKNGNTPRVVRGFDVLSNDEGAA
AENNLSINEQESKRSRSNTPVRGWRDKDKDKEKDRLKEKETPTVARTPAKIRDKAVDVEM
CYKQQRGGEKDLLNLVVVGHVDAGKSTLMGHLLYLQGNVGQRMMHKYEQESKKIGKQSFM
YAWVLDDTEEERSRGVTVDIAQRVFESDKKKITLLDAPGHKDFIPNMITGAARADVAILV
VDATTDAFEAGFESGGQTREHALLIRSLGMTQLAVAVNKLDTVNWSQERFMEIKTSLRHF
LKTVGFKDADVIYVPCSGLSGENLMKPSTIEALNSWYTGPTLLQAIGVQVENAEPSTAFA
GDPVTLTISGVDPNVLHVGDFLCDPSEPIPLAIRVQARIVLFNIKVPLIEGTQVDFHYQS
LTEPAKIRKLVSQVHKTTGQIVKKRPRALVNNSAGLIEIQFTRPLCLELFRDYKELGRFM
LRIRGATIAAGLVTQILN
NT seq 2037 nt   +upstreamnt  +downstreamnt
atgtcgcggcacaggaactacaggaatcttgattttgaagaagaatatgactcctacgat
gaggtcttgggccattccgttgaggacagtgaatgtgggatgtctccaggaatggagcag
tacctctatagccgaagtaaggatgctgcccatgggtttgcatcttacttaccaactgga
gaagacatcaaggaggaggaggaggctgtagatgagacactacatcagcctggatcactg
gataggagcagacacgattcctccacttatgaaaagcctcccttgtcgacagaagatgag
gttcggttgtcatcgatcatggacgaacttcacaatattttaggagatcagtatagtgaa
agagaacttacacaaactatcattgcaaacaagtttgagctggaggcctcactgaatgca
ctcctaaataagggggcatcagctgcagctgcagttgcacagcctttcagtaacagggca
gaaaggggtaacgcgaaaggcaatgatcagacagcttccgcttatgtagagcagctctcc
ctgtcacgcaatgcagacacaaataaaagtgctcctttgcaaggcaagaggacaccagct
tcgaaagcagttggcaaattggctgcaactccagtggtagttgctacacccaataagaat
gggaatacacctagagtggtgcgagggtttgatgtgctcagcaatgatgaaggtgcagca
gcagagaacaacctgagcatcaatgagcaagagtccaagaggtcacgttcaaacacgcca
gtccgcgggtggcgggataaagacaaagataaagagaaggacagactcaaagagaaggaa
actccaaccgttgcaaggaccccagcaaagatccgagacaaggcagttgatgtggagatg
tgttacaagcagcagagaggaggagaaaaggacctacttaatctggtggttgtaggacat
gtggatgctggaaaatcaaccctaatgggacatctcttgtatcttcagggcaatgttggt
cagaggatgatgcacaaatatgagcaagagagcaagaaaataggaaaacagtctttcatg
tatgcttgggttttggatgacacagaggaagaaaggtctcgtggtgtcacagttgacata
gcacaaagggtgtttgagtcagataaaaagaaaatcactttgctggatgccccgggtcac
aaggacttcattcccaacatgatcactggagcagcaagggctgatgttgcaatcttagtt
gttgatgctaccacagatgcttttgaggctggctttgagagtggaggtcagactcgggag
catgctttgctgattcgatccttaggcatgacacagttagcggtagcagttaacaagctt
gatactgtcaactggagtcaagaacgtttcatggaaattaagactagcctccggcatttc
cttaaaactgttggcttcaaggatgcagatgtgatttatgtaccttgctcgggtttgtct
ggtgagaacttgatgaagccaagcacaattgaagctttaaactcctggtacactggtcct
actcttctgcaagctattggcgtccaggtggagaatgccgaaccctcaactgcatttgcg
ggtgaccccgtaacacttacaatctctggtgtagatccaaatgtgctacacgttggtgac
ttcctgtgtgatccttcagaacctattccacttgccataagggtgcaagcacggatagtt
ctctttaatattaaggtcccactaattgaaggaactcaggttgacttccattaccagtca
ctcacagaaccagccaaaatacgcaagttggtttcccaagtccacaagacaacgggacaa
attgttaagaaacggcctcgcgctctagtcaataattctgctggcttgatagagatccag
ttcactcggcctctctgtttagagctcttccgtgactataaagaactgggtcggttcatg
ctgaggattagaggagctacgatcgctgcaggactagttactcagatcctaaactaa

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