KEGG   Penaeus chinensis (fleshy prawn): 125047502
Entry
125047502         CDS       T08118                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
pchn  Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:pchn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pchn03041]
    125047502
Spliceosome [BR:pchn03041]
 Complex B
  Other components
   Complex B specific factors
    125047502
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz WDR55 Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st LisH_TPL Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_NWD2_C Beta-prop_TEP1_C WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 Beta-prop_DCAF4 Beta-prop_NUP159_NUP214 Ge1_WD40 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_VPS8 Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_HPS5 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_SCAP Beta-prop_WDR35_TULP_N Beta-prop_IP5PC_F Beta-prop_EIPR1 Mala_s_1-like Beta-prop_BBS7 PROPPIN VPS8_N Beta-prop_LRRK2 VPS11_N Beta-prop_IFT122_2nd LisH_PAC1 DUF7165 WD40_like FlgD_ig
Other DBs
NCBI-GeneID: 125047502
NCBI-ProteinID: XP_047501697
LinkDB
Position
41:5927775..5936588
AA seq 513 aa
MSIEIESADVIRLIQQYLKENNLTRTLRALQEETSITLNTVDSVESFMADINQGHWDTVL
KAIQTLKLPDKKLIDLYEQVVLELIELRELGAAKSVLRNTDPLIMLKQTVPERYVHLENL
IARSYFDPREAYPEGVTKERRRAAIAAALAGEVSVVPPSRLLALLGQALKWQQHQGLLPP
GTQIDLFRGKAAMREQEEEKVPTQLARFIRFPQKAHVESAHFSPDGQYLVTGSFDGIIEV
WNFTTGKIRKDLKYQEKDSYMMMESAVLSLAFSRDSEMLSAGSQGGQVKVWRVSTGQCLR
KVERAHSEGVTSLAFNKDNSQVLSTSFDNTLRIHGLKSGKTLKEFRGHSSFVNQATFTQD
GHNIISASSDGTVKVWSVKTTECIATFKSLAGVTSVDLPVFSVHILPKNPDHIVVCNRSN
TVTIMNMQGQTVRSLSSGKREGGDFVSCVVSPRGEWIYCVGEDQVLYCFSTSTGKLERTL
NVHEQSVIGMCHHPHQNLLATFSEEGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtcgatagaaattgaatcggctgatgtgatcaggttgatccaacagtacctaaaggaa
aataacctgacacgaacactacgagctcttcaggaggaaacttccatcacgctcaacaca
gtggactccgtggagagcttcatggcagatatcaatcagggtcactgggatactgtgctc
aaggcaatccaaacactgaaactcccagacaagaaactcattgacttatatgagcaggtt
gttctggagctgatagaactgagagagttgggagctgccaagtcagtgctacgaaataca
gatccccttattatgttgaagcagactgtaccagaaaggtatgtccatttggagaacctg
atagcccgttcatattttgatcctcgagaagcatatcctgaaggagtaacaaaggagagg
aggagggcagcaatcgcagcagccctggcaggcgaagtgtcagtcgtgccaccatctcgt
ctcttagccctccttgggcaggccctcaagtggcagcagcatcagggtcttctgccacct
ggtacccagattgatttgttccgaggtaaggcagccatgagggagcaagaggaggagaaa
gtacccacacagctggcaagatttatccgtttcccacaaaaagcacatgtagagagtgcg
cacttcagtcctgatggacagtaccttgtcactggcagctttgatggcattatagaagta
tggaatttcaccacaggtaaaattcgtaaggatttaaagtaccaagaaaaagattcgtac
atgatgatggaatctgctgtactgagtttagccttcagcagagattctgaaatgctgtct
gctggctctcagggaggacaagttaaggtatggcgtgtcagtacaggtcagtgcctgcgg
aaggtagaacgtgctcactctgagggtgtaacatcccttgccttcaacaaagataacagt
caagttttgtccacatcctttgacaacacactcagaatacatggattaaaatctggaaag
acgttaaaggaatttcgcggtcactcttcatttgtcaaccaagccacatttacccaagat
ggacacaatataatcagtgcatcatcagatggtactgtcaaagtctggtcagtcaaaacc
acagaatgtatagctaccttcaagtcactggctggtgtgacctcagtggatcttccagta
ttctctgtccacatcttacccaagaacccagaccacatcgtagtgtgtaatcggtccaac
actgtgactattatgaacatgcaaggccagacagtcaggtcactgtcctcaggtaagaga
gagggtggtgacttcgtatcatgtgtcgtgtcacctcgtggagagtggatctattgtgtt
ggtgaggatcaggtgttatactgcttctctacttctacaggcaagctagagagaactttg
aatgtccacgagcagtctgtgattggtatgtgtcaccatccacatcagaacttgttggcc
actttcagtgaagaaggtttactcaagctgtggaaaccttga

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