Penaeus chinensis (fleshy prawn): 125047538
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Entry
125047538 CDS
T08118
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pchn03009
]
125047538
Ribosome biogenesis [BR:
pchn03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
125047538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
125047538
NCBI-ProteinID:
XP_047501771
LinkDB
All DBs
Position
4:complement(1703112..1721089)
Genome browser
AA seq
2832 aa
AA seq
DB search
MKEKPNRQAHKATNTFTFKKFSEKVRGLRVSARKFLLQRAHSTATEQTSVFHQTFSKCRE
LNLTEAFQAFQEDLKYSIVTTAQLVHHENRIATCLTKHLAVLSSPALQPLLDLLVAFAND
IPQEFYQNHFYKFLSILLRHLSTKEPEQIESVFLCIVSLFVVLQKYLRNDLFELYHVHNY
ARLLSKSHPWYINELAAQSLAFLVRKAPNMENFLGMALRKLKKDETHVDGLGRLFAALMK
SDVVQRLHSSTPVVLNHLLNLLAGEDVPPDLALQAVCSGILTLNFYITTPHPDKITRWEV
SWEEDSKLVWPTVWEQVKSILPHTQTSDSCHHLHAIIQVIQKLVSFKRGALVADLNDALN
QCVAIIQMPLPDSIGTTVCDIVSVLLTSRHQPLTHAMLHQTVTSIFMSQYSHSVKFSFVK
QMVDFERFDTEILPVLLHYLSTVISTTKDADVHKDVVSVIAYIILTKQIPCNSGLDLSSW
EKYPIDFTQILAKMDTSVESNIPSYIEDKVSEGIQDDLSNLEELLLILVCLPHISPLNHE
KLKPHFQEILKTSIMNLNDVGTKITPSVDVTPKKKKTKVADLLVDVNVKYDISLTSRRLL
FLVGMVVEGMAHVLSGKQFLACLDKCSLLDVLMQKPHYRENVHFLKAIDLQLSIASREEA
SDVMNEAFLKRIYPSLAPVLASANPQVRLLGTHIFSLFPVTLPPPPENVENVENIFQIML
KVEMTPVTPFSFRDRVRFLETINGDLVKVHKPVCDTYVHAPLLFFLGQLFVNYKDLWNPC
LKGISSYAHTLPLDSFWQLWFAKLKIATDNCQQMLINKVVDPDEDLDIENEIIQTVVQHL
SSHQSYSKVVIKADHMNYRDLMWRSMEKFPDVCEARSRDLVPLFFDFLHNELFPVDFNVA
PTQNISKTRREETSIVEEEISMNESGMDALTNIEDKIPDSSLDEDLESEVRSRRVPLKAL
GEQLAVFSKFHNPRKLSQTKKLQDMYKEFLTHPAPSVQRKALNCIMTYNYPYLVPYTEFL
YKLIDDKSFKNAITLFSLDGSEQTVSEEHREDMMPYLMRILFGKMHSKAGTGTSGKGKIL
IRKGVILRYLAGAKESELRIFLDLAFDVLLSHIEGDALTMVERTKQTLDITKVVPLGRLR
GALTTLDNIISKMGNLLMELLPTLLKVVLFIANLATTLLEQRTEIGDRSVSLLKHLRQDS
HRRLIAFFKKFENYTWSENEINAVFEAVVWPNLKRLPDEGISSPSTLLILFKCWSENPRY
FPLLIKCHREDHTLTPLPYVMKLLNHEKCKPSVVNVILDMVENLINLQDFEDVEEEAYIE
GKKPSPLSCSPVIPVKRLQSRDGTYEQNLGTALLVPHMEGLLKSMKSMVTKLSKNQLVKE
RDLTILRNLSEWVTNKENSSDLLSLIAPLIVKKNVEKIEKVPELLTICSHLLQVVDNSAE
YLAPFISQFGTMGSRDARESLCNVVSVIASSNPKYKELAEMAEDLNSWNPKMVEEVDYER
RLSAHDHFKKYCTSTEVIDVEYCQLFLFNSMYLIRQVDDSSLRDMSSFTLCQMIDMLVRL
QPKFKSEFERIVANNFLTEIRKGLHSKKEKVRIEIISLLKQLILKCHGQVERLQDLYKLV
NETETDMDFYCNMGHIQRHRRARAMARLSEKLDSGEISLASSTVDGYLLPLVTSYLFQEA
YIKDDYLITSSISCLGSLAKKMPWYSYQKLLKYYLNMLSKQELKFLKQAVRVLESVLDGF
HEEVEIPAVEDIIVNENIKKPEDPTATLVGTEDVQAKMGEEGVVDKEEENLMVEKEEEEG
LGKEEAEEEVADDEEEEQEKEIEQATSISKGQRVYGALVGVFIPQLQKTLAARTKADTEH
KVNKSKYPEDEDIKRIPLAFALVKLLKKLPQKMLDTNINGVLMKVIHFLKSRAESIRDEA
RSMLVKIMVEIGGSYLLWVVRDLRSILTRGYQAHVLVYTLHAILSQLRPLLTSTDINVCL
RDMIEICKEDILGVQAEEKEVSEITRKVKESRGNRSYAILAFTAEFISAECLQEIILPLK
EVLTLTQDKKVVNKMVRCLSEICSGLERNENIPITQKSVFIYGMLNEKILTLTAEKEEKK
PSEKKGQERIDSFILEPEPKKTRLNPKTSFKATAHVLIEFAVQFLAGLLKKGKFIPEDKE
HAMLLDPFLKVLTKCIDSEYPEICVYALRCISIMIKFPLPSLQTDLKNICEQMFLILHKF
SSPELAKGKIYDLVQLSFKSLAHIVKSVDSYLLNEEELRILLQYLSGNIQDHNQQQTAFV
VLQSIIARKINAPELHKLMRTVQKMSVTCGGINALTQARTTFYTYLLTYPMKPKIIEEHI
TFYLGNTSYSELDGRLSASIMINNIVANFPAKLLGKKIETNMWFSLSKQLIVEESQENKT
LLHKALKTMFKRSKGKKELIDLCLQLIRERPKSTVKTNSVAMQMGLKALSAFLDVTVKLL
PEIILSKAAPMIIQLLEPSRYSVQFTNMQEDTDDINLSKETYHKDNCIVALLEVFTKIVR
AFFTHENWSKHTDPDVWKYVQAHLLYPHIQVRLNAAGLIGYLLAAHPVEESVSPPLATNT
DEARSLALDICEQLRTEAPIGMALLTQLSLSVIRNLIYLVRHSCKVPLVKKKGGEVENVN
GDSELANGEGKTDMVIGNEAEPIPSAVWVVRHVGNFAYEELQRHGRDSTIVRESLLNLIA
GLVVVVGEKINESMLLGYIVKHLARELSDEKLPENLATKTKEVATMVKGLVGVEVYTRHL
TAAQVVLAKKRHERKARNMQQRALNPALADKKRKKKNLTSRESKKRKIAERKGKIIRKKK
AKLIDRAVVADR
NT seq
8499 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagaagcccaatcgccaggctcacaaggccaccaacaccttcaccttcaagaag
ttcagtgagaaggtgcgagggctccgtgtcagcgccaggaaattcctcctgcagcgagca
catagtaccgccacagagcagacttcagtgttccaccagaccttctcgaagtgcagggaa
ttaaatctcactgaagctttccaggccttccaagaggatctgaaatacagcattgtgaca
actgcccagctcgttcaccatgaaaatcgcattgctacatgtttgaccaaacaccttgcg
gttctcagctccccagcattacagcctctgttggatctgctggttgcctttgctaatgac
atcccacaggaattctaccaaaaccatttctataagttcctttcaatattgttacggcat
ttgtccaccaaggaaccagaacagattgagtcagtattcttgtgtattgtttccttattt
gtagttcttcagaagtacctgcgtaatgatctatttgaattatatcatgtacataactat
gcaaggctgctctccaaatcccatccatggtatattaatgagttggctgcacagagtctt
gcatttttggtgagaaaggctcccaacatggaaaatttcttgggcatggctctgaggaag
ctgaagaaagatgaaacccatgtggatggactaggcaggctgtttgcggcattgatgaaa
tcagatgttgttcagcgcttgcatagttccactccggttgtactaaatcatttgttgaat
ctgcttgctggggaagatgtaccaccagacctagcattgcaggctgtgtgtagtggtata
ctgacattaaacttttatatcacaacacctcatccagacaaaattaccaggtgggaagta
tcttgggaggaagactcaaaactagtgtggcccacagtctgggaacaggtgaaatctatt
cttccacacactcaaacatcagacagctgccatcatctacatgctattattcaggtgatt
caaaaactggtctccttcaagagaggtgccttggttgctgatctgaatgatgctttgaat
caatgtgtggccataatccaaatgcccttacctgacagcattggtacgactgtgtgtgac
atagtatcagttttgcttacttctcgacaccagccattaacacatgccatgctccatcaa
acagtaacctcaatattcatgtctcagtactctcattcagttaaattttcatttgtaaaa
caaatggtggactttgagagattcgatacagaaattctcccagtattactacattatcta
agtacagttataagcacaacaaaggatgcagatgtccacaaagatgttgtttctgttatt
gcatatataatattgactaaacagataccttgtaattcaggcctagatttaagttcttgg
gaaaaataccctatagatttcacacaaatattagcaaaaatggacacatctgttgagagt
aatattccatcttacattgaagacaaagtctcagaaggaattcaagatgacttgagcaac
ttggaggagttactgctgatacttgtgtgtctgcctcacatatcaccattaaaccatgag
aagttgaagccacacttccaagagattcttaaaacttcaattatgaatttgaatgatgta
ggaaccaaaattaccccaagtgtagatgtgactcccaagaagaaaaagacaaaagttgca
gatcttttggttgatgtaaatgtcaaatatgatatttccttaactagtagaagattgctg
tttcttgtaggaatggtagttgaagggatggcacatgttctcagtggcaaacagtttctt
gcatgcttagacaaatgctcattattagatgtgctgatgcaaaagccacattacagggaa
aatgtacatttcttaaaagcaatagatctacaattgtccatagcatccagagaggaagca
agtgatgtgatgaatgaagctttcctgaaaagaatatatccttcccttgcaccagtcctt
gcctctgcaaaccctcaagtgcgcctcttagggacacacatcttttccctgtttccagta
acgcttcctcctccaccagagaatgtggaaaatgtggagaacatatttcaaattatgctg
aaggttgagatgacacctgtgacaccattttctttcagggatcgagttcgtttcctggaa
acaattaatggtgaccttgtcaaggtgcataaacctgtgtgtgacacttacgttcatgct
cccttactcttctttcttggtcagttatttgttaactacaaggatttgtggaatccttgt
ctcaaaggaatatcaagttatgcacatactcttcctttggattcattctggcaactttgg
tttgcaaaactgaaaattgcaactgataactgtcaacagatgttgatcaataaggtggtg
gaccctgatgaggatcttgatattgagaatgaaattatccagacagttgtgcaacatttg
tcaagtcaccagagctactcaaaagttgtcattaaagctgatcacatgaactacagagac
ttgatgtggaggagcatggagaaattccctgatgtgtgtgaggctcgtagcagggatctg
gtgccacttttctttgatttcttgcacaatgaactctttcctgttgattttaatgtagct
cccacccaaaacataagcaagacaagaagagaagaaacttcaatagtggaagaagagata
agcatgaatgaaagtgggatggatgccttaaccaatattgaagacaaaatacccgattcc
tcattagatgaggatctagaatcagaggtgcgctcacggagggtaccactgaaagcacta
ggtgagcagttggcagttttttcaaagttccataaccccagaaagttgtctcagacaaaa
aagttacaagacatgtacaaggagtttcttacacatccagcaccttcagttcagagaaag
gccctcaactgcataatgacttacaattatccatatcttgtgccgtatacagagtttttg
tacaagcttatagatgacaaatccttcaagaatgccatcacactcttcagtttagacggc
tcagaacagactgtttcagaggagcatcgtgaagatatgatgccttatctcatgaggatt
ctctttggtaagatgcattcaaaggctggaacaggaacatctggcaaaggaaaaattttg
attcgaaagggtgtgatactaaggtacttggctggtgcaaaggaaagtgaattaaggata
ttccttgatttagcatttgatgttttgttgagtcatatagagggagatgctttgaccatg
gtagaaagaaccaagcaaactctggacatcacaaaggtggtgcctctgggaaggttgcga
ggtgctcttaccacactggacaatattatcagcaaaatgggtaatctgctcatggaatta
ttgcccactcttttaaaggtggtactcttcatagcaaacctagcaacaacacttcttgag
caacgaactgaaattggagatcgatctgtatccctcttgaaacacctgcgtcaggattca
catcgacggcttatagctttctttaagaaatttgagaactacacctggtctgaaaatgaa
ataaatgcagtgtttgaggcagttgtgtggcccaatttgaagcgtctaccagatgaaggt
ataagttcaccttcaaccttacttattctcttcaaatgctggtcagagaatccaagatat
ttcccattacttattaaatgtcatagagaagatcataccttaactccattgccatatgtt
atgaaacttctaaaccatgaaaaatgcaaaccctctgtggtaaatgttattttggatatg
gttgaaaatctcattaatcttcaggattttgaggatgttgaagaagaggcatatattgag
ggaaagaagccatcgccactttcttgttcaccagtcattccagtcaaaaggttgcaatca
cgagatgggacatatgagcaaaaccttggtacagcattgcttgtgccacacatggagggc
ctcttgaaaagcatgaagagcatggtaaccaagttgagcaaaaaccaattggtaaaagag
cgtgacctgactattctcagaaatctctcagagtgggtcacaaacaaagaaaacagcagt
gatcttctgagtttgattgcacctcttattgtcaagaaaaatgtggaaaagattgaaaag
gttccagagttgctcacaatttgcagtcaccttttgcaggtagtagacaattcagctgag
tatctagcgccattcatttctcagtttggaaccatgggcagtcgggatgctagagaatca
ctttgtaatgtggtgtcagtaattgcctcctctaatccgaagtataaagaattagcagaa
atggcagaggatcttaattcctggaaccccaaaatggttgaagaggttgactatgagaga
agactgagtgcccatgaccatttcaagaagtattgtacatccacagaggtaattgatgtt
gagtactgtcagctcttccttttcaacagcatgtacttaatacgccaggttgatgattct
tcgctgcgagatatgtcaagttttacattatgtcaaatgatagacatgttggtgagactg
cagcctaaatttaaaagtgaatttgaacggatagtggcaaataatttcctaacagagatc
agaaagggattacacagtaagaaagaaaaagtcaggatagagattatatcattattgaaa
cagttaatcttgaagtgccatgggcaagtagagagacttcaagatctttataagcttgtc
aatgaaactgaaacagatatggacttctattgcaacatgggccacatccaaaggcacaga
agggcacgtgcaatggcaaggctttcagagaagcttgatagtggggagatttcattggca
tcttcaacagtcgatggctaccttttgccattggttacatcataccttttccaagaggca
tatataaaggatgattatttgataacaagttctataagttgcttagggagtttagccaag
aaaatgccttggtactcatatcaaaaattattgaaatattatctgaatatgctatccaag
caggaattgaaattcctcaagcaagctgtaagggttttagaatcagttcttgatggattc
catgaagaagtagaaataccagctgttgaggacataatagtgaatgagaacattaagaaa
ccagaagatcccactgccacccttgtgggtacagaggatgttcaggcaaaaatgggagag
gaaggggttgtagataaagaagaggaaaatttgatggtggaaaaagaggaagaggaaggt
cttggaaaggaagaggcagaggaagaggttgcagacgatgaagaagaggaacaggaaaag
gaaattgagcaagcaaccagcatcagcaagggacaaagagtgtacggagccttagtaggt
gtgtttataccacagctccaaaagacattggcagcacgaactaaagctgacacggaacat
aaggttaataaaagtaagtatccagaagatgaggacattaaacggattcctctggctttt
gccttagtgaaactccttaaaaaacttcctcagaaaatgcttgatactaatatcaacggt
gtgttaatgaaggtgattcactttttgaagtctagagccgagagcataagagatgaagcc
cgtagcatgcttgttaagatcatggtggaaattggagggagttacttgctgtgggtagta
agagatttgcggagcattttgactcgtggttatcaggcacatgtgttagtttatacacta
catgccattctttcccaactccgaccattgctgacttccacagatatcaatgtctgtctg
agagacatgatagaaatctgtaaagaagatattcttggagtacaagcagaggagaaggag
gtcagtgagattaccaggaaggtgaaggaatcgcgtggtaataggagctatgcaatcttg
gcattcactgcagaattcatatctgctgagtgccttcaggaaatcattttaccattaaaa
gaggtgctcactttgacacaagataagaaagtggtgaacaaaatggtgcgttgcttatct
gaaatatgcagtggattagagcgcaatgaaaacatccccatcactcagaagtcagtgttc
atttatggcatgctgaatgagaagatcctcaccctaacagcagaaaaagaagaaaagaaa
ccatctgagaagaaaggccaagagcggatagattccttcatcttggaaccagaacccaag
aagactcgactgaatcccaagacatcatttaaagcaactgctcatgtcctaattgaattt
gcagtgcagtttcttgccggtctgctgaaaaagggcaaatttataccagaagataaagaa
catgctatgttgctggatccattccttaaggtgttaacaaagtgtattgattcagaatac
ccagagatatgtgtgtatgctcttagatgtatcagtataatgatcaaatttccacttcct
tctctgcaaacagatttgaaaaacatatgcgagcagatgtttttaatactgcataagttc
tcctctccggaacttgccaaaggaaagatttatgaccttgtccagttatcattcaaatct
cttgctcatattgtaaagtctgttgactcctacttgctgaatgaggaggagctgaggatt
ttgttacagtacttgagtggtaatatacaagaccacaatcagcagcaaactgctttcgtt
gttttgcagtccataattgcgcgcaaaattaatgcacctgagttgcataagttaatgaga
acagtgcagaaaatgagtgttacatgtggtggaataaatgcattaacacaggcacgcaca
acattttacacctatttgctcacttatccaatgaagcctaaaataatagaggaacacatt
actttttatcttggaaatacatcttactctgaactagatggtagactgtctgcaagtatc
atgattaacaatatagttgctaactttccagcaaaacttcttggtaaaaagatagaaaca
aatatgtggtttagtttatctaaacagcttatagttgaagaatcacaagagaataagact
ttgttgcataaagcactcaaaactatgttcaaaagaagtaaagggaaaaaagaactaata
gacctttgtctccagttaataagagagcggccaaaatctacagttaagacaaattctgtt
gcaatgcagatgggtctaaaagcactaagtgcttttcttgatgttacagttaagcttctt
cctgaaattattctcagcaaagcagcaccaatgataatacaacttttagagccatcaagg
tacagtgtgcaattcactaacatgcaggaggatactgatgatataaacttaagcaaggag
acttatcataaagataactgtatagtggcactactagaagtattcacaaaaatagttaga
gcatttttcacccatgaaaattggagcaaacacactgatcctgatgtctggaagtatgtg
caagctcatttactctatccccatatccaagtccgattaaatgcagctgggctaattgga
tatttgttggctgctcatcctgttgaagaaagtgtatcacctcctcttgctacaaacact
gacgaagcgcgttcacttgctttagatatatgtgaacagctgagaacagaagccccaatt
ggtatggcactcttaacgcaactctcactctctgttattagaaatttgatatatttggta
cgccattcatgtaaggttcctcttgtgaagaagaaaggtggagaagtcgagaatgtgaat
ggtgatagtgaattagccaatggtgaaggaaaaactgacatggttataggaaatgaagcg
gagcccatccccagtgcggtctgggttgttcgtcatgttggaaattttgcctatgaagaa
cttcaaaggcatggcagagattccaccattgtccgtgagtctctgctcaatctcatagca
ggcttagtggttgtggttggagagaaaattaatgaaagtatgctgttaggttacattgta
aaacacttagcccgtgagctctcagatgaaaagctccctgaaaacctagccacaaagaca
aaagaggtggcaaccatggtgaaagggcttgttggtgtcgaggtttatacacgtcacctc
actgctgcccaggtcgtgttggctaagaagcgtcatgagcgtaaggcacgtaacatgcag
cagcgtgcattgaatccagcacttgcagataagaagagaaagaagaagaatctaacaagt
agggaatctaagaaacgcaagattgctgaaagaaaaggcaagattatcaggaaaaagaaa
gcaaagttgatagaccgagctgttgttgcagatagataa
DBGET
integrated database retrieval system
