Penaeus chinensis (fleshy prawn): 125047685
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Entry
125047685 CDS
T08118
Name
(RefSeq) pre-mRNA-splicing factor 38A-like
KO
K12849
pre-mRNA-splicing factor 38A
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125047685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pchn03041
]
125047685
Spliceosome [BR:
pchn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
125047685
Complex C
U4/U6.U5 tri-SnRNP related factors
125047685
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Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
125047685
NCBI-ProteinID:
XP_047501998
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All DBs
Position
41:26270052..26276581
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AA seq
466 aa
AA seq
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MANRTVKDAHSIHGTNPQYLVEKIIRTRIYDSRYWKEECFALTAELLVDKAMALRSIGGV
YGGNIKPTPFLCLVLKMLQIQPEKDIIIEFIKQDEFKYVRALGAFYLRVVYGSLDCYKYL
EPLLNDYRKLRLMDRSGEYQLSHMDEFIDSLLREERICDVILPRMQKRWVHEANNELEGR
VSLLDDDLDDLESESDDEEPLTPPPRPTRDMIEPSRTAPRDERHGRGHSPLRRSPGRDTR
NEREREKRHRSRSRSRDRDRGMERDRGMERDHGMERNRGADRDRGIDRDRGSDRDRGMDR
DRLMDRDRGMDRDRGMDRDRGMDRERMMDRDRGMDRDRGMDRDRGMDRDRQMERERKRHR
SRSRERRHRSRSRSPGHHTHHRERMRGEKDRDHRHGDRDKDRGDRDHGRERNRDRDRDRD
RSDRKEKHHRSGRSKRDNVSAMSREDLEIAEANALRAQLGLPPLRP
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccgaaccgtgaaggatgcccactccatccatggcacaaatccgcaatacttg
gtggagaaaattattcgaactcgcatatatgattcccggtactggaaggaagaatgcttc
gccttgacagcggagctcttagtagacaaagcaatggccttaaggagcattggtggagtg
tatggtggaaatattaaacccacgcccttcttgtgcctcgtgttgaagatgctccagatt
cagccagaaaaggatattataattgaatttattaagcaagatgaattcaaatatgttcgt
gcactaggagccttttatttacgggtagtatatgggtctttagattgctacaagtatttg
gagcctttgcttaacgactacaggaagcttcgtttgatggatcgctctggcgagtatcag
ctctctcacatggacgaattcattgacagtttactgagagaagaacgtatttgtgacgtg
attttacccagaatgcagaaaagatgggttcatgaagccaacaatgaactggaaggaaga
gtttcattattagatgatgacttggatgacttagaaagcgagagcgacgatgaagagcct
ctgacacccccaccacgtcccacaagagacatgattgaaccttcccggactgctcccaga
gatgagaggcatgggagaggtcactctcctctacgccggtctcctggcagagacacaaga
aatgaacgagaaagggaaaaaagacaccgcagtaggagccggtcacgtgacagagaccgt
ggcatggagcgtgatagaggaatggaaagggatcatgggatggaaagaaatagaggagca
gacagggacagaggcatagatagagacaggggttcagatagagacagagggatggataga
gacagattaatggacagagatagaggcatggacagggatcgagggatggacagagatcgg
ggcatggatagggaacggatgatggatcgagatagaggtatggatagagacagaggtatg
gatcgggatagaggtatggacagagataggcaaatggagagagagaggaaacgtcatcgc
agtcgctctagagaaagacgccaccgatcacgatcaagatctccaggtcaccacacacac
catcgtgagcgtatgcgaggagagaaggatagagaccatcgtcatggagatcgtgacaag
gacagaggagacagagatcatggaagagagcgaaatcgggaccgggacagggatcgcgac
cgcagtgaccgtaaagagaagcaccaccgcagtggacgcagcaagagggacaatgtttct
gcaatgagtcgagaagacctagaaattgctgaagccaatgctctaagagcacagttgggg
ttgccacctttgcgcccgtag
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