Penaeus chinensis (fleshy prawn): 125047742
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Entry
125047742 CDS
T08118
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2-like
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125047742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchn03021
]
125047742
Enzymes [BR:
pchn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125047742
Transcription machinery [BR:
pchn03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
125047742
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
125047742
NCBI-ProteinID:
XP_047502110
LinkDB
All DBs
Position
41:27022643..27031638
Genome browser
AA seq
1146 aa
AA seq
DB search
MGETVIGSLVPEWADLDPNTLGEPVKSIEDKWKLVPAFLRVKGLVKQHIDSFNYFINVDI
KNIVKANSKVTSDVDPLFYVKYMDVRVGKPNIEEGMNIVSETAPHECRLRDITYSAPIMV
DVEYMRGDHRIFRRDIPIGRMPIMLRSSNCVLSQCRTHAELAKYNECPHDPGGYFIIKGQ
EKVILIQEQLSKNRMIVEEDKKGGLTCQVTSSTHEKKSRTNVTMKNGKYYIKHNTLTDDV
AVGIVFKAMGVTSDQEIVQMIGTEDRIMTSFAASLEECARLNVYTQTQALKYIGGKVRQK
RFFDRGPKKTPVDEARDLLATTILAHVPVEKFNFKMKSIYLALMVRRVIEAQGDTRIVDD
RDYYGNKRLELAGSLISLLFEDLFKKFNSDLKKKSDIILGKKGKVSQFDAVQYMQSSQDA
ITNGLEVAISTGNWTIKRFKMERQGVTQVLARLSYISALGMMTRVNSQFEKTRKVSGPRS
LQPSQWGMVCPSDTPEGESCGLVKNLALMTHITTEVDPEPIIELAFNCGVEDINLLTGEE
LSNRDVFLVFLNGNIIGVTRDRRRVVRVFRAMRRNNVISGFVSIYPHNKHRCVYISSDGG
RLCRPYMIVENCRPAVTEHHIERLARGLMTFDDFLHEGLVEYLDVNEENDSSIAMYEHEI
SPKTSHMEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLLY
NLVYPHKPLVKTRTIELINFEHLPAGHNAMVAVMSYSGYDIEDAIIINKASLDRGYGRCI
VYRNAKCSVKRYANQTSDKVQGPLMQVLEGGKQKPIWKHETLDSDGLAAVGTPVLPRQVL
INKQMPTVTQLSYTDGQAQRQVEFRDTPVVHKGPGSIYVEKVMLSSDPDEFNLIKILLRQ
TRRPEIGDKFSSRHGQKGVTGLIVQQENLPFSDHGMYPDMIMNPHGFPSRMTVGKLMELL
GSKAAALEGKFNYGTAFGGTSVKDIMEDLVKHGFNYQGKDMLYSGTTGEALKGYIFFGPV
YYQKLKHMVMDKMHARSRGPRAVLTRQPTEGRARDGGLRLGEMERDCLIGHGASMLLLER
LMISSDAFDVDVCNSCGLLGYSGWCHYCRSSANVSSIRIPYACKLLFQELQSMNIVPRLR
LQNYCS
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgggggagactgtgatagggagcctggtgccagaatgggcggacttggatcccaatacg
ctgggggaacctgtcaaaagcattgaggataaatggaagttagtcccagcatttcttcgt
gtcaagggcctggtgaaacagcacatagattcctttaactacttcatcaatgtggatatc
aagaacatcgtcaaggccaacagcaaagtcacaagtgatgttgatcctttgttctatgtt
aagtatatggatgtacgtgttggaaagccaaacattgaagaaggaatgaatattgtaagt
gagacggcaccacacgagtgcagactccgtgacattacatattcagctccaatcatggtc
gacgtggaatacatgagaggggaccacagaatctttagacgagatattcccattggtcga
atgccaatcatgttgcgatcatcaaattgtgtgttgtcacagtgtagaacacatgcagag
cttgcaaaatataatgagtgccctcatgatcctggtggatatttcataatcaaaggacag
gagaaagttattctcatccaggaacagctttccaaaaatcgtatgattgttgaagaggac
aagaaaggaggactaacatgccaggtgacgtcatccacgcatgagaagaaatctcgcacc
aatgtgactatgaagaatggaaaatattacatcaagcataacaccctgactgatgatgtt
gctgttggcattgttttcaaagccatgggagtaaccagtgaccaggagattgtacagatg
ataggaacagaagacaggatcatgacatcttttgcagcatctctggaggaatgtgccaga
ctgaatgtgtatacgcaaacacaggcactgaagtatatcggtggcaaagtgcgacagaag
aggttctttgaccgtggccccaaaaagaccccagtagatgaagcaagagatttgttagcc
acaactattctggctcatgtacctgttgaaaagttcaattttaagatgaagtccatctat
ctggctctaatggttcggagagtgattgaggcccagggtgacactaggattgttgatgat
cgagattactatggaaacaagaggctggagcttgcagggtccctgatctcccttctattt
gaagatttattcaaaaagttcaattctgacttgaaaaagaagtctgatattattcttggc
aaaaagggcaaagtatctcagtttgatgctgtacagtatatgcagtctagccaagatgca
ataaccaatgggttggaagttgccatctcaacagggaactggaccatcaagaggtttaag
atggagaggcaaggagtcacacaagtgctggcaagactttcttacatctcagctttgggt
atgatgaccagagtgaactcccagtttgaaaagacaaggaaagtgagtgggcccagatcc
cttcaaccttctcagtggggaatggtgtgcccctctgacacaccagaaggagagtcttgt
ggtcttgtgaagaatctagctctaatgacccacattaccacagaagtagatccagaacct
atcatagaattggcattcaattgtggtgtggaagacatcaatcttctgactggagaagaa
ctgtcaaacagagatgtcttcttagttttcctcaatggtaacatcataggtgttacaagg
gatcgccggagagtggttcgtgtgttccgggccatgagaaggaataatgtcatcagcggt
tttgtttctatataccctcacaataagcatcggtgtgtttacatcagctctgatggaggc
cggctctgtcgtccatacatgattgtggagaattgtcgaccagctgtgactgaacaccat
atagaaagactagctcgaggtttaatgacatttgatgattttttgcatgaaggtttggtg
gagtatttggatgtgaatgaagaaaatgactccagtattgccatgtatgaacatgaaatt
agtccaaaaacatcacacatggaaattgaacctttcacaatcttaggtgtctgtgctgga
ttgatcccatatccgcatcataaccagagtcctcgtaatacctaccaatgtgctatgggt
aagcaggctatgggaactataggctataatcagcggaacagaattgataccttactgtat
aatttagtgtatcctcataaacctcttgttaaaacaagaactattgaacttatcaacttt
gaacatctccctgctggacataatgctatggtagcagttatgagctattcaggatatgat
attgaagacgccatcattataaacaaggcatcccttgatagaggctatggacggtgtatt
gtttacagaaatgccaaatgttcagtgaaacgctatgccaatcagacatcagataaagtt
caaggcccactcatgcaggttttagaaggagggaaacaaaagccaatatggaaacatgaa
accctagatagcgatggcttagcagcagtcggtacaccagttcttccaagacaggtgttg
attaataagcaaatgccaacagtgacacaactttcatatactgatggacaagcacaaagg
caggttgaattccgggacacaccagtagtacataaggggccaggaagtatttatgtagag
aaagtgatgctgtcatcagatccagacgaattcaacttgatcaagatccttttgagacag
acacgaagaccagagataggtgacaagttctcctctcgccacggccagaaaggtgtgaca
ggcctgattgtgcaacaggaaaaccttcccttctcagatcatgggatgtacccggacatg
atcatgaaccctcatggtttcccttctcgaatgacagttggaaagctcatggaacttcta
ggtagtaaagcagctgctctggaaggaaagttcaattatggaactgcctttggtggtaca
tcagttaaggatatcatggaggatctagtcaagcatgggtttaattatcagggcaaagac
atgctttacagtggtacaactggtgaggcattgaaaggttacatcttctttggaccagta
tactaccaaaagttgaagcatatggttatggacaagatgcatgctcgatctcgtggtccc
agagctgtcctgactcgacagccaacagaggggcgcgcacgtgatggtggcctcaggctt
ggagagatggagcgtgattgcctaattggccacggggcaagtatgttgttgctagaacgt
ctcatgatatcctcggatgcatttgacgttgatgtttgcaactcctgcggcctgttgggt
tactctgggtggtgtcactattgccggtcatcagctaatgtgtcatccatacggatacct
tatgcatgtaaacttttgttccaagaactgcagagtatgaatattgtacctaggttgcgc
ttgcagaattattgtagttaa
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