Penaeus chinensis (fleshy prawn): 125047823
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Entry
125047823 CDS
T08118
Name
(RefSeq) retinoblastoma-binding protein 5 homolog
KO
K14961
COMPASS component SWD1
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pchn03036
]
125047823
Chromosome and associated proteins [BR:
pchn03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
125047823
COMPASS/SET1 complex (yeast)
125047823
MLL-HCF complex
125047823
MLL3/MLL4 complex
125047823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
EIF3I
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_LRRK2
Beta-prop_Vps41
Beta-prop_WDR11_1st
Beta-prop_NUP159_NUP214
Frtz
WDR54
Motif
Other DBs
NCBI-GeneID:
125047823
NCBI-ProteinID:
XP_047502274
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Position
42:3506773..3520784
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AA seq
490 aa
AA seq
DB search
MNLELLESFGQNYPEEFDGALDCASLAGTCAFNRRGTLLAVGCNDGRIVIWDFLTRGIAK
VISAHVHPVCSLSWSRGGYKLLSVSTDNNVCIWDVLSGECDIKYRFPSPVMKAQFHPRND
KIFLVCPMRHPAVLVNVDASHKIVPMDDEGDVNIVASFDRRGEYIFTGNSRGKLLILSCP
ELEVKSTFRIGQGTTSAAAIKSIDFARRTEFFLVNSADRVIRVYDAKKVLRCGKDDDPEP
IQKLQDLVNKTMWKKCCFSGDGEYICAGSARQHSLYIWERSVGNLVKILHGTKGEMLLDV
VWHPVRPILASISSGVVSVWSQNQVENWSAFAPDFKELDENVEYEERESEFDQSDEDKSV
EMSQEKKEEDIEVDVTAIEPVAAFCSSDEEDDSSTLLYLPISPEIEEPEEGWGPEGAPNE
DLNSKRSGDCKENISPKKKRPKTFDVTLENAPTDEVHPLASNRPKDKQMAGNKKGRNNSK
GDSKKDRKKH
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcgagcttttagaatcgtttggccagaactacccagaggaatttgatggggcc
ctggactgcgcatcactagctggcacctgcgcttttaatagacgcggcactctactggcc
gtggggtgcaatgacggccgaatcgtcatatgggatttcttgacccgcggcattgcgaag
gtcatcagtgctcacgttcatcctgtttgttctttaagctggtcacgagggggctacaag
ctccttagtgtttctaccgacaataatgtctgcatatgggacgtcctgagcggggagtgc
gatatcaagtacagatttccctcacccgttatgaaggcccaatttcatccacgcaatgac
aagatcttcctagtttgccccatgagacatccagcggtgctcgtcaacgtcgatgcctcg
cacaagattgttccaatggatgatgagggagacgtcaacattgttgcctccttcgaccgt
cgcggagagtacatattcacgggcaacagccgagggaagctgctcatcctctcctgccca
gagttggaggtcaaatcaacattcaggatcggccaaggaaccacaagtgccgctgccatc
aagagtattgactttgcgcgcagaacagagtttttccttgtgaattctgctgaccgtgtt
attcgcgtttacgatgcgaagaaagtccttaggtgcgggaaagatgatgatccagaacct
atacagaagttacaggatttagttaacaaaaccatgtggaagaaatgctgcttctctggc
gatggcgaatatatctgcgcaggctcggccagacagcactccctgtacatttgggagcgc
agcgtgggaaacctggtcaagatcttgcacggtacaaagggagagatgcttcttgatgtt
gtgtggcatccagtgcgaccaattttggcatccatcagctctggggtggtgtctgtgtgg
tcacagaaccaggtggaaaactggtcggcttttgcccctgacttcaaggagttggacgag
aatgtggaatacgaggagagagaatcggagttcgaccagagcgacgaggacaagagtgtt
gaaatgagccaggagaagaaggaggaggatattgaggtggacgttacagcgatagaacct
gtagcagccttctgcagctcagatgaggaagatgacagcagtaccctcctgtacctcccc
atctcaccggagattgaagagcccgaggaaggttggggaccagagggggcacctaatgag
gacctgaacagcaagcgctcgggcgactgcaaggagaatatatccccgaagaagaagaga
cccaagacctttgatgttaccttagagaatgcacccacagatgaagtgcaccccttggca
agcaacagaccgaaagacaagcaaatggcagggaataagaagggaagaaataactcaaaa
ggagactctaagaaggatagaaaaaaacattaa
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