Penaeus chinensis (fleshy prawn): 125047873
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Entry
125047873 CDS
T08118
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2-like isoform X1
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pchn03016
]
125047873
Enzymes [BR:
pchn01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
125047873
Transfer RNA biogenesis [BR:
pchn03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
125047873
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
DUF4216
Motif
Other DBs
NCBI-GeneID:
125047873
NCBI-ProteinID:
XP_047502363
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Position
42:complement(3054914..3058428)
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AA seq
387 aa
AA seq
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MASVPPPRKKARVQEEAGAPLPVPVEALTGLPASSGGWSYYSAVYKNGIIEVTDTQDALA
LWHNGYYGYDRIEPSDFEDTRNISRFHRKKCWKLLCTDDLQPRSFFTRPVENNGQKTSGN
AADTQIENHKNSEKSEEESNCMSQLHEVKQTEEGEAYSNDNSFHCQNEKDKSIKTVLDLS
SRHRERETVLEEDDEALHEGMKLMPEEAMFLSYALGCLVVSQSVRRQSCQYSSEGNDMYR
EMTIDEMWTAFTRADKTFPIRYAVYHHYRTKGWVVKSGLKFGTDWVLYPVGPPFYHAQYT
VLIQCVWSDTLLRDDSISWREFSWINIAATERLNSHVAKAPLICLVLRPRGLTDSQLERP
QCLHQLSIQELLLSRWLPSAQDQEEEA
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagtcccccccccacgcaaaaaggctcgagtccaggaggaggctggtgcaccc
ttgcccgtccctgttgaggcactgactggattgcccgcctcatcaggtggctggtcttac
tacagtgctgtttacaaaaatgggattatcgaagtgacggatactcaggatgctcttgct
ctctggcataatggttactatggctatgacaggattgaaccaagcgactttgaagacaca
agaaatatcagtaggtttcatcgcaaaaagtgttggaaactattgtgcacggatgacttg
caaccaagatcctttttcacaagaccagtggaaaacaatggccagaaaacctcagggaat
gcggcagatacacagattgaaaatcataaaaatagtgagaagtcagaggaggaaagtaat
tgtatgtcacagttacatgaagtgaaacaaactgaagaaggtgaagcatattctaacgac
aactcatttcactgtcaaaatgaaaaggataaatctattaagaccgtcttggatttaagt
agtcgccatagggaaagagagactgtgttggaagaggatgatgaggctcttcatgaaggt
atgaaacttatgcctgaggaagccatgtttctgtcctatgctctcgggtgtttggtcgta
tctcagagtgtccggcgacagtcttgccaatattcatcagagggaaatgacatgtaccgt
gagatgacaatagatgagatgtggacagcattcaccagagctgataaaacatttcccata
agatatgctgtttaccaccattatagaaccaaaggttgggtcgtcaaatctgggctcaaa
tttggcactgactgggtactgtatccagttgggccgcctttttatcatgcacaatacaca
gtcctgatccagtgcgtttggtccgatacccttcttagagatgatagcatctcttggaga
gaattttcttggattaacatcgctgccacagaacgcctcaattctcatgttgcaaaggcc
ccacttatctgccttgtgcttcgccccagaggtctaacggacagccagctggagagaccc
caatgtctgcaccaactaagcatacaggaacttctcctttctcgttggctgccaagcgcc
caggaccaagaggaggaggcgtga
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