Penaeus chinensis (fleshy prawn): 125047876
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Entry
125047876 CDS
T08118
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3-like
KO
K22611
spliceosome associated factor 3, U4/U6 recycling protein
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pchn03041
]
125047876
03036 Chromosome and associated proteins [BR:
pchn03036
]
125047876
Spliceosome [BR:
pchn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
125047876
Chromosome and associated proteins [BR:
pchn03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
125047876
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
Suf
Lsm_interact
HAT_Syf1_CNRKL1_C
RRM_7
YHR127W_C
RRM_11
RRM_occluded
RRM_3
NRDE-2
RBD_DGKtheta
RRM_ACIN1
CFAP70_mid_TPR
LSM_int_assoc
Motif
Other DBs
NCBI-GeneID:
125047876
NCBI-ProteinID:
XP_047502370
LinkDB
All DBs
Position
42:complement(17366116..17391070)
Genome browser
AA seq
967 aa
AA seq
DB search
MSQIADEMADEQEEMLQDSSGDGSSDEDDDINEQREGELRTKVEEIRKQLDGNELYYDGH
VNLITALRELMELEEARKAREKMSEVYPLTPELWLDWIRDEQKICSTPKEREYIVNLFER
AVKDYTSVQVWMEYVMFMLGGGDNTVTRTVGEKALTAVGTHVAEGLLVWQVVLLVEKQIY
SGLQRPGTVQSEEDMKAQEKQQKRIQSLYRRLIRVPLLNADYQHLMEEAAEFFEADFDVH
MKADLEKTKQKLNEKIPFEEKLLQAGNDTSKLATYRLYIQYLQENDNPAATQSLYERAVS
DHCLDASLWEEYVKFVIRQFPDLDYVVLPICERSQRNCPWSAALCELHISALQLFSVGEE
TKTFMKKVKGALEKGLGSGLQSGSEATRMWMSYLVCQRRLIKWDQEHAGELDALRESGQQ
AITMIDSYFGESGDIESEIPRFLARIEAEFAKNMERAREIWNDIIMKRNNNFKNVSLWLE
FINLERSYGTEKHCRKLFRRSLERVWDWVESIGSAYLHFEQETGTIESMEDFQKRYEDRM
VIVNKKRAEDAAKFGETNENQERRHQRDKGKRQDKKRQAFVQPETATFKAPHPVSKRKDT
QNRKVSTPHEGSNGNDAPQSAESAVMPPPPGHKEDVTPPPGFKDVVTPPPGFKSDVPPPP
GFKDTITPPPGFKDSSSPPPGYTGSSSKAKKREREDYTDTEHEVKKLKVAELHGVRIKED
DCEDLCTVFLSNLEFSVGKEEVVPIFASCGEVKDFRLVKDYKCRSKGFGYLVFKTQSAAA
NALKYDRTAIKGRPMYVSAYDPDGHTHQFQYSTGLEREKVFIRGLPFSLTEEKIKELFIS
HGEIKEIRLVTYRNGHSKGLCYLTYPNAETAEKVVKAMDGTEIEGKIISVMISDPSNKMK
PNEGNASTNPAVKNSEKKVPGSRGKGMFNLMPRSLMRATSTAEPTSSEPETPIKPKSNED
FRKMFLK
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaatagctgacgaaatggcagatgagcaagaagagatgctgcaggattctagc
ggggatggctctagcgatgaagatgatgatatcaatgaacaaagagagggggagttgaga
acgaaagtagaggaaatcagaaagcagttggatgggaatgagctgtattatgatggccat
gttaatctgataactgctttgcgagaactcatggagttagaggaggcacgcaaagcaagg
gaaaagatgagtgaagtttatccactaactccagaattatggctggactggattcgtgat
gaacaaaaaatttgctcaacaccaaaggagagggagtacattgttaatctctttgaacga
gctgttaaagattataccagtgtgcaggtatggatggaatatgttatgttcatgctggga
ggaggagacaacaccgtaacaagaacagttggagaaaaagctcttactgctgttggaaca
catgtagctgagggccttcttgtttggcaagtggtgctcttagtggagaaacagatttac
agtggacttcagagaccagggacagttcaatctgaggaagacatgaaagcccaagaaaag
cagcagaaaagaatacaaagcttatacagaagactgattcgtgttcctttgctcaatgct
gattatcaacacctgatggaggaagcagctgaattttttgaagctgattttgatgtgcac
atgaaagctgatttggaaaaaacaaagcagaaactgaatgaaaagatcccctttgaagag
aaattgttacaagctggaaatgacaccagtaaattggctacatatcggctgtacatccaa
tacttacaagagaatgacaatccagctgctacgcaaagtttatatgaaagagctgtctca
gatcactgccttgatgccagtttatgggaggaatatgttaagtttgtgattcgacagttt
cctgacctggactatgtggttttgcccatatgtgagagaagccagagaaactgcccttgg
tcagctgctttatgtgagctacacatctccgcattacagctgttctctgttggggaagaa
acaaaaacatttatgaagaaagttaaaggggcactggagaaaggcctaggatctggtctt
caatctggcagcgaggcaacaagaatgtggatgtcatatctagtgtgtcagagaaggttg
attaagtgggaccaggagcatgcaggagaactggatgccctcagggaatctggacagcaa
gcaataacaatgattgacagttactttggagaaagtggtgacattgagagtgaaattcct
cgtttccttgcacggatagaggcagaatttgcaaagaatatggagagagcccgtgaaatc
tggaatgacataattatgaagcgaaacaacaacttcaagaatgtgagcttgtggcttgag
ttcatcaatttggaaaggagttatggaacagaaaagcattgccgcaaactcttccggcgt
tctttggagcgtgtttgggactgggtggagagcattggtagtgcatacctccattttgag
caagaaactggtactatcgaatccatggaggattttcagaaaagatatgaagataggatg
gtgattgtaaataagaaaagagcagaagatgctgccaaatttggggaaacaaatgagaac
caagaaagaagacatcagagagacaaagggaaacggcaagataaaaagagacaagctttt
gtgcagccggaaactgcaacttttaaagccccacatcctgtatcaaaacgtaaagatact
caaaatcgcaaagtcagcacaccacatgaaggctcaaatggtaatgatgctcctcaaagt
gcagagagtgcagtcatgccaccaccaccagggcacaaggaggatgtgactccaccacct
ggcttcaaagacgttgtaacaccacctccaggctttaagagtgatgttcctcctcctcct
ggcttcaaagataccataacaccaccacctggctttaaggatagcagctctccaccacca
ggctacacagggtcctcttccaaggctaagaagagagaaagagaagattacacagatact
gagcatgaagttaaaaaattaaaagtggcagagctgcatggtgtgcggataaaggaagat
gactgtgaagacctgtgtactgttttccttagcaatttagaattcagtgttgggaaagag
gaagtggttccaatatttgccagctgtggagaagtaaaggacttcaggttggtgaaggac
tacaaatgccgtagtaagggcttcgggtacctggtgtttaagacacaaagtgcagcagca
aatgctttaaagtatgaccgtactgcaattaaaggacgcccaatgtatgtatcagcatat
gatcctgatggccacactcatcagttccagtattctacaggtttagagagagagaaggtt
tttattaggggcttgccattctcgctaacagaagaaaaaattaaagaacttttcatttca
catggtgagatcaaagaaatacggcttgtcacttaccgcaacggacattctaaaggactt
tgctacctaacatatcctaatgcagaaacagcagaaaaggttgtcaaagcaatggatggc
actgaaatagaaggcaagatcatatctgtcatgataagtgatccttctaacaaaatgaag
ccaaatgaaggaaatgccagtaccaatccagctgtgaaaaacagtgaaaagaaagtacca
ggatcacgagggaaaggtatgttcaacttaatgcccagatcattgatgcgtgccacatct
acagctgaacccacttcatcagaaccagaaactccaatcaaacccaagagtaacgaggac
tttcgtaaaatgtttttgaagtaa
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