Penaeus chinensis (fleshy prawn): 125047948
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Entry
125047948 CDS
T08118
Name
(RefSeq) LOW QUALITY PROTEIN: tetratricopeptide repeat protein 28-like
KO
K24936
tetratricopeptide repeat protein 28
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pchn03037
]
125047948
Cilium and associated proteins [BR:
pchn03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
125047948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TPR_10
TPR_MalT
TPR_16
TPR_4
Rapsyn_N
TPR_11
TPR_19
Motif
Other DBs
NCBI-GeneID:
125047948
NCBI-ProteinID:
XP_047502451
LinkDB
All DBs
Position
42:complement(22454725..22478195)
Genome browser
AA seq
1958 aa
AA seq
DB search
MLQVVGANVAGHVYTAIGDYPNALASHKQCVQLVKQMGDKLQEAREIGNVGAVYLAMGDF
DSAVDCHMEHLRIAKHLNNKVEEARAYSNLGSSHHYKRNFDQAIAFHNHVLRIAQDLGDR
TIEARAYAGLGHAARCMSDYGQAQRWHEKQLDMALSTKDKVAEGRACSNLGIVYQLMGHH
DAALKLHQAHLNIARLLQDRAGMGRAYGNIGNAYSAMGYYEQAIKYHKQELTISKEVNDR
MSEASTHGNLAVAYQALGMHEMALLHYHSHLNIARELKDTAGEACALLNLGNCHSSRGEF
AQAVPYYEQYLMLSQELHDTEGEARACHFLGYAHYCLGNFKEAIRYYDQDLALAKDLQDR
KSMGRAYCNLGLAHLALGNSETALECQKYFLALAHMMKHLQGKFRALGNIGDVLMKMKNY
DEAVKVYQKQLVLAKQSRDKVLEASAYGALGLAHRLLKCFDKALGYHTQELTIRQEMGDI
KGECKAHGHLGAVHMSLANYTNAMKCYQEQLERAKELKDAAMEAQAFGNLGIARLNMGHF
EDAIGYLEQQLATLEQLSTTTAVVDKGRAFGNLGDCYDALGDSEEAIKCHEQYLAIALKT
KSPRDQERAYRGLGSSHRCVGNLQQALVCYEKRLVVSHELNIPAAKGSAYGELGHIHYLL
GNFEQAISCMEHQHKIARELGDKQSEGEAACGLGTVYQQMCEYNTALRYHQLDLKIAGEL
ANPAEQGRAHGNISLAYESLGNFEQAVTHGEQHLSIAAQMNDKVAKTLAYASLGRVHHAL
GNTTQAVAYLQQGLQIAEQLGRREDEAKIRHRLGMALWGHGDLEAAQTQLDRAAHLLDTI
RREARGSQDYRLSLFDLQTASYQALQRVLVGLGRNEDALLVAERGRTRAFVDLLLERQGA
STSSRASRIEDSTPSSVDQIVDIVNRQKASVLYYSIAAGCLYSWLIVPNKGIVKFHEVSV
SEVEAEREGDCGEDAVGTSGSLLEHYIQSVRDALGVECGAGATRGGVSSETESEAGDMWN
AHLEELGDKLNHEADRTGFLRMVNRNHLFNSSNYSLSSLFSLGSVSGSIASGSASRPGST
RSRRVTWQGPSCLRSLYELLIAPMEDHLPETGVTRELMLVLEGDLYLVPFPVLKGTNSND
YLCERFSLLVVPSISALKXNQRSKNSKPSGEQTSALVIGNPKLPSTVTEQWGWGDIPYAE
QEATIVAEMLQTKALTSACANKEAIIRLISQVECIHLATHVSWKLSAVILSPGEFVESRA
SKRLSHSSQPEAIHEHLDDESSDIASTIDLPALSEFLLTAADILNLKLRAKLVVVSSCHT
RDHHGRANSDGVVGFIRALLAAGAQCVLVSLWPVPDTAVKILFRTFYSSLLQGARVSRAL
SEAQQTVQTTKHFAHPANWAGFLLVGADVKLSNKVALMGQALCELLRTPDKCRDALRVTL
HLVEKSLQRIHRGHRNAMYTTQKSIENKVGNVSGWKDLLMSVGFRFEPAANGIPSSVFFP
QSDPGERLTQCSASLQALLGLSQTSLQAVSKLLDSPEYAEDVISVMRAVITQFTVKDLEN
ESIEVPVHVKLWRVNGCHELLASLGFDLMEVGRDEVTLRTGKQANKRNIQFAHQALLALF
DTQEAPKSLSVDSSSSLESLVSTDDEEESVAAPPPPPPPSQPLLPHRTAPLLLGRGAFSS
YVRNRGEPDGARASTSEQKGRESDAAFTPSPVDPGAKYARAFRSPHGPPSDTGSPQPSPR
LSLTLAHQNKIRSMYTSNSPASDGGGKRPDSSSSTSSMTDWESGQATVRRQPIAKPVITS
KAPISATHSRVSDVSAGFMRPHYVSINKSNSQASSGFESQSSDSDFGPRRTGTVRSVYTT
VGSASTLKLSKSATMDTLDRLSVRTEVGRPMVGGARGRRDRSTERELSGDNAEGQATGAS
AAVVSTAARGEEGEDAGLVAELGRCRRPREMSNEIPAV
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaggttgttggggcaaatgttgcaggccacgtgtacacagccatcggcgactac
ccgaacgcgctggcgtcgcacaagcagtgcgtgcagctggtcaagcagatgggcgacaag
ctgcaggaggcgcgcgagatcggcaacgtgggcgccgtgtacctggccatgggcgacttc
gacagcgccgtcgactgccacatggagcacctgcgcatcgccaagcacctcaacaacaag
gtggaggaggcgcgcgcctacagcaacctgggctccagccaccactacaagcgcaacttc
gaccaggccatcgccttccacaaccacgtgctgcggatcgcgcaggacctgggcgacagg
accatagaggcgcgcgcctacgcgggcctgggccacgcggcgcgctgcatgagcgactac
ggccaggcgcagcgctggcacgagaagcagctggacatggcgctcagcaccaaggacaag
gtggcggagggccgggcctgctccaacctgggcatcgtgtaccagctgatggggcaccac
gacgcggcgctcaagctgcaccaggcgcacctgaacatcgcgcggctgctgcaggaccgc
gcgggcatgggccgggcctacggcaacatcgggaacgcgtactcggccatgggctactac
gagcaggccatcaagtaccacaagcaggagctgaccatcagcaaggaggtcaacgaccgc
atgagcgaggcctcgacgcacggcaacctggccgtggcctaccaggcgctgggcatgcac
gagatggcgctgctgcactaccactcgcacctcaacatcgcccgcgagctcaaggacacc
gccggcgaggcctgcgcgctcctcaacctcggcaactgccactcgtcgcgcggggagttc
gcgcaggccgtgccctactacgagcagtacctcatgctgtcgcaggagctgcacgacacc
gagggcgaggcgagggcgtgccacttcctcggctacgcccactactgcctcggcaacttc
aaggaagccatcaggtactacgaccaggacctggcactggcgaaggacctgcaggaccgg
aagtcgatggggagagcctactgcaacctcggcctggcgcacctcgccctcggcaactcg
gagaccgccctcgagtgccagaagtacttcctggccctcgcccacatgatgaagcacctt
cagggcaagttccgcgccctgggcaacatcggagacgtgctcatgaagatgaagaactac
gacgaggccgtcaaggtgtaccagaagcagctggttctcgccaagcagtcacgtgacaag
gtcctcgaagcctcggcgtacggagcgctcggcctcgcgcaccgcctcctcaagtgcttc
gacaaggctctcggctaccacacgcaggagctgacaatccgacaggagatgggcgacatc
aagggcgaatgcaaagcccatggccacctgggcgccgtccacatgtcgctcgccaactac
accaacgctatgaagtgctaccaggaacagctggagcgagcgaaggaactgaaggacgcc
gccatggaggcccaggcgttcggcaacctgggcatcgcgaggctcaacatgggccacttc
gaggacgccatcggctacctggagcagcagctggccacgctcgagcagctgtccaccacg
accgccgtggtagacaagggccgcgccttcgggaacctcggcgactgctacgacgccctc
ggggactcggaggaggccatcaagtgccacgagcagtacctggccatcgccctgaagacg
aagagcccgagggaccaggagcgagcctaccgcggcctcgggagctcccacaggtgcgtc
gggaacctccagcaggcgctcgtgtgctatgagaagcgcctcgtcgtgtcccacgagctc
aacatccctgctgccaagggctctgcttacggcgagctcgggcacatccactacctgctg
ggcaacttcgagcaggcgatttcgtgcatggaacatcaacacaagatcgccagagagctc
ggggacaagcagagcgagggcgaggcggcgtgcgggctcggcaccgtgtaccagcagatg
tgcgagtacaacacggccctccgataccaccagctggacctcaagattgccggggagctg
gcgaaccccgcggagcaagggcgggcgcacgggaacatcagcctggcgtacgagtcgttg
ggaaattttgagcaggcggtgactcatggcgagcagcatctcagcatcgccgcgcaaatg
aacgataaggtggccaagacgttagcctacgcctccctcggccgcgtgcaccacgccctg
ggcaacaccacccaggctgtggcgtacctgcagcagggcctccagatcgccgagcagcta
ggccggcgcgaggacgaggctaagatccggcaccgcctgggcatggccctgtgggggcac
ggcgacctggaggcggcacagacgcagctcgaccgcgccgcccacctgctcgacaccatc
cggcgggaggcgcgcggctcgcaggactaccgcctgtccctgttcgacctacagacagcg
tcgtatcaggcgctgcagcgggtgctggtgggcctgggccgcaacgaggacgccctgctc
gtggcggagcgggggcgcacgcgcgccttcgtcgacctccttctggagcggcagggcgcc
tcgacctcctccagggcgtcgcgcatcgaggactcaacgccgtcgtccgtcgaccaaatt
gtggacatcgtcaaccggcagaaggcgtcggtgctgtactacagcatcgccgccggatgc
ctctacagctggctcatcgtgcccaataaaggcatcgtgaagttccacgaggtgagcgtg
agcgaggtggaggcggagcgcgagggcgactgcggcgaggacgccgtcggcacgtcgggc
tcgctgctggagcactacatccagtcggtgcgcgacgccctcggcgtggagtgcggcgcc
ggagccacgcgcggcggcgtgtccagcgagaccgagagcgaggccggcgacatgtggaac
gcgcacctggaggagctcggtgacaagctcaaccacgaggccgaccggacgggcttcctg
cgcatggtcaaccgcaaccacctgttcaactcgtccaactactccctgtcgtcgctgttc
tccctcggctccgtcagcgggtccatcgcctcgggctcggcctccagaccgggctcgacg
cgctccagaagggtcacgtggcagggcccgtcgtgcctccgctcgctctacgagctgctg
atcgctcccatggaggaccacctgcccgagaccggcgtcacgagggagctcatgctggtg
ctggagggcgacctgtacctcgtgccgttcccggtgctcaagggcaccaactccaacgac
tacctgtgcgagcggttctcgctgctcgtggtgccgtccatcagcgcgctcaagntgaac
cagcgctccaagaactcgaagccaagcggcgagcaaacgtcggcgctggtcatcgggaac
cccaagctgccgagcaccgtgacggagcagtggggctggggcgacatcccctacgcagag
caggaggccaccatcgtcgccgagatgctgcagacgaaggccctcaccagcgcctgcgcc
aacaaggaggccatcatcagactcatctcgcaggtggagtgcatccacctggcgacgcac
gtgtcgtggaagctgtcggccgtgatcctgtcgccgggcgagttcgtggagtcgcgcgcg
tcgaagcggctgtcgcactcgtcgcagcccgaggccatccacgagcacctggacgacgag
agctccgacatcgcctccaccatcgacctgcccgcactctccgagttcctcctgacggcg
gccgacatcctcaacctcaagctgagggctaagctggtcgtggtgtcgtcctgccacacc
cgggaccaccacgggcgcgccaacagcgacggggtggtgggcttcatccgggcgctgctg
gccgccggcgcccagtgcgtgctggtgtccctgtggcccgtgcccgacaccgccgtcaag
atcctcttcaggactttctactcttctctactgcagggggcgcgagtgagccgggcgctg
tcggaggcccagcagacggtgcagaccacgaaacacttcgcccacccggccaactgggcg
ggcttcctcctcgtgggcgccgacgtcaagctctcgaataaggtggctctgatgggtcag
gcgctgtgtgaactcctacgcacgcctgacaagtgtcgagacgccctcagagtgacgttg
catttggtcgagaagtccctccagcgcatccaccgaggtcaccgcaacgccatgtacacg
acgcagaagtccatcgagaacaaagtcgggaacgtgagcggctggaaggacctgctgatg
agcgtgggcttccgcttcgagcccgcggccaacggcatccccagcagcgtgttcttcccc
cagagcgaccccggggaacggctcacccagtgctcggccagtctgcaggcgctgttgggt
ctctcccagacatccttacaggcagtctcgaagctcctagactcccccgaatatgcagag
gacgtcatctccgtcatgcgcgccgtcatcacccagttcaccgtcaaggacctcgagaac
gagtcaatcgaggttccggtgcatgtcaagctctggcgcgtcaacggctgtcatgaactc
ctggcgtcgttaggctttgacctgatggaggtcgggcgggacgaggtcacgctgcggacg
gggaagcaggccaacaagcgcaacatccagttcgcgcaccaggccctgctggcgctcttc
gacacccaggaggccccgaagagcctgagcgtcgactcgagcagcagcctcgagtccctg
gtgagcaccgacgacgaggaggagtccgtggccgcgcccccgccgccgcccccgccctcg
cagccgctcctgccgcaccgcacggcgccgctgctgctgggccgaggcgccttctccagc
tacgtcaggaaccgcggcgagcccgacggcgcccgcgcctccaccagcgagcagaagggg
cgcgagagcgacgccgccttcacgccctcgcccgtggacccgggcgccaagtacgcccgc
gccttccgctcgccgcacggcccgcccagcgacacgggctcgccgcagccgtcgccgagg
ctgtctctgacgctggcgcaccagaacaagatccgctccatgtacacgtccaactcgccg
gccagcgacggcggcggcaagcggcccgacagctcgtccagcacgagcagcatgacggac
tgggagagcggccaggccacggtgcggcgccagcccatcgccaagcctgtgatcacctcc
aaggcgcccatctccgccacgcacagccgcgtcagcgacgtcagcgccggcttcatgcgc
ccgcactacgtgtccatcaacaagagcaactcgcaggcgtcgtcgggcttcgagtcgcag
agctccgactccgacttcgggccgcgccgcacgggcaccgtcaggagcgtctacaccacg
gtgggcagcgcgtccacgctcaagctcagcaagagcgccaccatggacacgctggaccgc
ctgagcgtgcgcacggaggtggggcgccccatggtcggcggcgcccgcggccggcgcgac
cgcagcaccgagcgggagctgtccggcgacaacgcggagggccaggccacaggcgccagc
gccgccgtcgtcagcaccgccgcccgcggagaggagggcgaggacgcgggtctggttgca
gagctgggaagatgccggaggccgcgcgagatgagcaacgagatacctgccgtgtag
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