Penaeus chinensis (fleshy prawn): 125048031
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Entry
125048031 CDS
T08118
Name
(RefSeq) cullin-4A-like
KO
K10609
cullin 4
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03420
Nucleotide excision repair
pchn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125048031
09124 Replication and repair
03420 Nucleotide excision repair
125048031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pchn04121
]
125048031
03400 DNA repair and recombination proteins [BR:
pchn03400
]
125048031
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pchn04147
]
125048031
Ubiquitin system [BR:
pchn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
125048031
DNA repair and recombination proteins [BR:
pchn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
125048031
TCR (transcription coupled repair) factors
Cul4-CSA complex
125048031
Exosome [BR:
pchn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125048031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
125048031
NCBI-ProteinID:
XP_047502574
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Position
42:90118..126405
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AA seq
797 aa
AA seq
DB search
MMSSPRAPPAFVSSESVSNGQRKRLSSGSPDRPHLQKKVCRQSDIMESQKVANFSSVAAP
NGVSKQPSGLGKKQGAEKKVLAIKNFKVHNQPAIDHIAESWRYLREAVVAIQESRKLRDN
LTQEDLYRYVDNLITERPPALLYTDLRDLTEKHIKSRLNQFLSGTSDRLTFLRQLNDCWT
HHCHQMKMVCNIFLALDRGYVLQNAQVSSIWDMGLELFRQNILEEVVVENRCVDGLLMMI
EKERSGETIDRSLVKSLLRMLSSLQIYHKVFENKFLVATEQLYLREGQRLMQDRDVPQYL
LHVDKRLTEENNRVLHYLDMSTKRQLIYCVEKQLLSEHKTHLLQKGLDSLLDQNRRPDLT
LLYNLFARIKGGLEDLCTHFNAYIKSFGKTIVINPEKDKGMVQELLDFKDKMDGIVSECF
SSSDKFVLALKEAFEHFINQRLNKPAELIAKFVDGKLRAGNKEATEDELERLLDKIMVLF
RFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGPGFTSKLEGMFKDMEL
SKDIMLAFKQNSHLGGTSMELNVNILTMGYWPNYPVMEVNLPSEMVKYQQIFTKFYLAKH
SNRKLQWQPTLGHCVLKAAFPLGSKELQVSLFQALVLLLFNDADSLSLADITSGTNIEDG
ELRRTLQSLACGKARVLQKMPRSKDVNDDDKFFYNKDFTNQLFRIRINQIQMKETSEEQQ
QTEERVFQDRQYQIDAAIVRIMKMRKVLPHNLLITELYNQLKFPVKPADLKKRIESLIDR
DYMERDKDNPNTYNYIA
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttccccgagggcgccgccagcctttgtgagcagtgagagcgtttcaaacgga
cagagaaaaaggctttcctcgggctcgccggaccgcccgcacctgcagaagaaggtctgc
cgacagagtgacatcatggagagtcagaaggtggccaacttctcctccgtggccgcgccc
aacggcgtcagcaagcagccctcgggcctcggcaagaagcagggcgccgagaagaaggtg
ctcgccatcaagaacttcaaagtgcacaaccaacctgccattgatcatattgctgagtcg
tggcggtatctcagagaagcagtagtagccatacaggaatcaagaaagctacgagacaac
cttacccaagaggacttgtaccgatatgtagataacttaatcacagaaaggcctccagcc
ttactttatactgatcttagagatcttacagagaagcatataaaatcccggttgaaccaa
ttcctgagtggaacaagtgaccggttgacatttttacggcagctgaatgactgttggaca
caccattgtcaccaaatgaagatggtgtgtaatatcttcctggcattggaccgaggatat
gtcttgcagaacgctcaggtttcctccatatgggatatgggactagaattgtttcgacaa
aatatactggaagaagtggtagtagaaaatcgatgtgtggatggtttactcatgatgatt
gagaaagaacgatctggggagaccattgacagatctcttgtcaaatcactgttaaggatg
ttgtcatcactacaaatctaccacaaagtgtttgagaataaatttttggttgcaacagaa
cagttatacttacgagaaggtcagcgtctcatgcaagaccgtgatgttccccagtacctt
ttgcatgttgataaacgactaacagaggaaaacaacagagttcttcactacttagacatg
tcaaccaaacggcagttgatatactgtgttgagaagcagctcttgagtgagcacaagaca
caccttctacagaaaggtttggattccctgctagatcagaatcgacgacccgacctcaca
ctcctgtataacctctttgcaaggattaaaggaggattagaagacctttgtacacacttc
aatgcatatattaagtcatttggaaagacaatagtgatcaacccagagaaggacaaggga
atggtacaggagctcctggacttcaaggataaaatggacggcattgttagcgaatgcttc
agctcgtcagataagtttgtgttggctctgaaagaagcttttgaacacttcataaaccag
agattaaataaacctgcagaattaatagctaaatttgtggacggcaagctcagagctggt
aataaggaagccacagaagacgagctggagagactcctggataagataatggtcctcttc
aggttcattcatggaaaggatgtctttgaggctttctacaagaaggatctggcaaagaga
ctgcttgtaggaaaatcagctagtgtggatgcagagaagagtatgttaagcaaactgaag
caggagtgtggtccaggattcacaagcaaacttgaaggcatgttcaaggatatggagctc
tctaaagacatcatgttagccttcaaacagaattcacaccttggaggcacatcaatggaa
cttaatgtaaatatattaacaatgggttactggccaaactatcctgtgatggaggtcaac
ttaccatcagaaatggtcaagtatcaacagatcttcacaaaattttatctggctaagcat
agcaataggaaactacagtggcaaccaaccctcggacactgtgtgttgaaagcagctttc
ccacttggaagtaaggagctgcaagtatcactcttccaagctcttgtgctgctcctgttt
aatgacgccgacagtttatcactcgctgacatcactagtggaaccaatattgaggatggg
gagctccgtcgaactttacagtccttggcttgtggcaaagcgagagtcctacaaaagatg
ccacgtagcaaagatgtcaacgatgatgataaatttttctataacaaggatttcaccaac
cagcttttccgtatcagaattaatcagatccaaatgaaggaaaccagtgaagagcagcag
cagacagaagagagagtattccaggaccgccagtaccaaattgatgcagcaattgtaagg
attatgaagatgaggaaagtccttccccacaacttgctcatcacagaactttataatcaa
ctcaaattccctgtcaagccagcagatttgaagaagaggatagagtccctcattgaccgt
gattacatggaacgagataaagataaccccaatacctataactacattgcataa
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