KEGG   Penaeus chinensis (fleshy prawn): 125048031
Entry
125048031         CDS       T08118                                 
Name
(RefSeq) cullin-4A-like
  KO
K10609  cullin 4
Organism
pchn  Penaeus chinensis (fleshy prawn)
Pathway
pchn03420  Nucleotide excision repair
pchn04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pchn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    125048031
  09124 Replication and repair
   03420 Nucleotide excision repair
    125048031
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pchn04121]
    125048031
   03400 DNA repair and recombination proteins [BR:pchn03400]
    125048031
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pchn04147]
    125048031
Ubiquitin system [BR:pchn04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     125048031
DNA repair and recombination proteins [BR:pchn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      125048031
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      125048031
Exosome [BR:pchn04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   125048031
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 125048031
NCBI-ProteinID: XP_047502574
LinkDB
Position
42:90118..126405
AA seq 797 aa
MMSSPRAPPAFVSSESVSNGQRKRLSSGSPDRPHLQKKVCRQSDIMESQKVANFSSVAAP
NGVSKQPSGLGKKQGAEKKVLAIKNFKVHNQPAIDHIAESWRYLREAVVAIQESRKLRDN
LTQEDLYRYVDNLITERPPALLYTDLRDLTEKHIKSRLNQFLSGTSDRLTFLRQLNDCWT
HHCHQMKMVCNIFLALDRGYVLQNAQVSSIWDMGLELFRQNILEEVVVENRCVDGLLMMI
EKERSGETIDRSLVKSLLRMLSSLQIYHKVFENKFLVATEQLYLREGQRLMQDRDVPQYL
LHVDKRLTEENNRVLHYLDMSTKRQLIYCVEKQLLSEHKTHLLQKGLDSLLDQNRRPDLT
LLYNLFARIKGGLEDLCTHFNAYIKSFGKTIVINPEKDKGMVQELLDFKDKMDGIVSECF
SSSDKFVLALKEAFEHFINQRLNKPAELIAKFVDGKLRAGNKEATEDELERLLDKIMVLF
RFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGPGFTSKLEGMFKDMEL
SKDIMLAFKQNSHLGGTSMELNVNILTMGYWPNYPVMEVNLPSEMVKYQQIFTKFYLAKH
SNRKLQWQPTLGHCVLKAAFPLGSKELQVSLFQALVLLLFNDADSLSLADITSGTNIEDG
ELRRTLQSLACGKARVLQKMPRSKDVNDDDKFFYNKDFTNQLFRIRINQIQMKETSEEQQ
QTEERVFQDRQYQIDAAIVRIMKMRKVLPHNLLITELYNQLKFPVKPADLKKRIESLIDR
DYMERDKDNPNTYNYIA
NT seq 2394 nt   +upstreamnt  +downstreamnt
atgatgtcttccccgagggcgccgccagcctttgtgagcagtgagagcgtttcaaacgga
cagagaaaaaggctttcctcgggctcgccggaccgcccgcacctgcagaagaaggtctgc
cgacagagtgacatcatggagagtcagaaggtggccaacttctcctccgtggccgcgccc
aacggcgtcagcaagcagccctcgggcctcggcaagaagcagggcgccgagaagaaggtg
ctcgccatcaagaacttcaaagtgcacaaccaacctgccattgatcatattgctgagtcg
tggcggtatctcagagaagcagtagtagccatacaggaatcaagaaagctacgagacaac
cttacccaagaggacttgtaccgatatgtagataacttaatcacagaaaggcctccagcc
ttactttatactgatcttagagatcttacagagaagcatataaaatcccggttgaaccaa
ttcctgagtggaacaagtgaccggttgacatttttacggcagctgaatgactgttggaca
caccattgtcaccaaatgaagatggtgtgtaatatcttcctggcattggaccgaggatat
gtcttgcagaacgctcaggtttcctccatatgggatatgggactagaattgtttcgacaa
aatatactggaagaagtggtagtagaaaatcgatgtgtggatggtttactcatgatgatt
gagaaagaacgatctggggagaccattgacagatctcttgtcaaatcactgttaaggatg
ttgtcatcactacaaatctaccacaaagtgtttgagaataaatttttggttgcaacagaa
cagttatacttacgagaaggtcagcgtctcatgcaagaccgtgatgttccccagtacctt
ttgcatgttgataaacgactaacagaggaaaacaacagagttcttcactacttagacatg
tcaaccaaacggcagttgatatactgtgttgagaagcagctcttgagtgagcacaagaca
caccttctacagaaaggtttggattccctgctagatcagaatcgacgacccgacctcaca
ctcctgtataacctctttgcaaggattaaaggaggattagaagacctttgtacacacttc
aatgcatatattaagtcatttggaaagacaatagtgatcaacccagagaaggacaaggga
atggtacaggagctcctggacttcaaggataaaatggacggcattgttagcgaatgcttc
agctcgtcagataagtttgtgttggctctgaaagaagcttttgaacacttcataaaccag
agattaaataaacctgcagaattaatagctaaatttgtggacggcaagctcagagctggt
aataaggaagccacagaagacgagctggagagactcctggataagataatggtcctcttc
aggttcattcatggaaaggatgtctttgaggctttctacaagaaggatctggcaaagaga
ctgcttgtaggaaaatcagctagtgtggatgcagagaagagtatgttaagcaaactgaag
caggagtgtggtccaggattcacaagcaaacttgaaggcatgttcaaggatatggagctc
tctaaagacatcatgttagccttcaaacagaattcacaccttggaggcacatcaatggaa
cttaatgtaaatatattaacaatgggttactggccaaactatcctgtgatggaggtcaac
ttaccatcagaaatggtcaagtatcaacagatcttcacaaaattttatctggctaagcat
agcaataggaaactacagtggcaaccaaccctcggacactgtgtgttgaaagcagctttc
ccacttggaagtaaggagctgcaagtatcactcttccaagctcttgtgctgctcctgttt
aatgacgccgacagtttatcactcgctgacatcactagtggaaccaatattgaggatggg
gagctccgtcgaactttacagtccttggcttgtggcaaagcgagagtcctacaaaagatg
ccacgtagcaaagatgtcaacgatgatgataaatttttctataacaaggatttcaccaac
cagcttttccgtatcagaattaatcagatccaaatgaaggaaaccagtgaagagcagcag
cagacagaagagagagtattccaggaccgccagtaccaaattgatgcagcaattgtaagg
attatgaagatgaggaaagtccttccccacaacttgctcatcacagaactttataatcaa
ctcaaattccctgtcaagccagcagatttgaagaagaggatagagtccctcattgaccgt
gattacatggaacgagataaagataaccccaatacctataactacattgcataa

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