Penaeus chinensis (fleshy prawn): 125048293
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Entry
125048293 CDS
T08118
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 1-like
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchn03021
]
125048293
03036 Chromosome and associated proteins [BR:
pchn03036
]
125048293
Transcription machinery [BR:
pchn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
125048293
Chromosome and associated proteins [BR:
pchn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
125048293
SLIK complex
125048293
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
HTH_CHD1_Hrp3
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
DEAD
RecC_4th
AAA_22
Motif
Other DBs
NCBI-GeneID:
125048293
NCBI-ProteinID:
XP_047502896
LinkDB
All DBs
Position
43:complement(15189772..15213956)
Genome browser
AA seq
1450 aa
AA seq
DB search
MIEVDWTQTQPKEEDENVQTIEKVLEHRVGKKGAVGMQTYLYEVEKNGDPNADFDPNDPE
QVETQYLIKWKGWAHLHNTWESEESLKTQKYNAFQVKGMKKLENYLRREEEMAIWRHRAS
PEEVEYMEIQSELEKELYVSHVRAERIFAEAEENGNHYYYMKWENLPYAEATWELESLVR
ERFIEQLESFEVREKSSCTPKQCPALKHRPKFSAMKVQPDYLGGANENLELRDYQMDGVN
WLIHAWCKHNSVILADEMGLGKTIQTISFLSYLFHTHAMYGPFLLVLPLSTLNAWQREFH
NWAPDINVIVYIGDRDSRRIVRDYEWTTSSKRLKFNAVLTTYEILLRDKEDLRDSCQWAC
LVVDEAHRLKNEESQLYQALKEFRSNHRLLITGTPLQNSLKELWALLHFIMPEKFDDWDY
FESQHDSENMRKGFHRLHKQLEPFLLRRVKKDVEKSLPAKVEQILRVDMMQQQKQFYKWI
LTKNYDMLKKGNRGSTSSFVNIVMELKKCCNHSHLIKPAEDTISTEILPALLRGSGKLML
LDKLLVRLRETGHRVLIFSQMVRMLDILAQYLQYRRFPFQRLDGSIKGELRRQALDHFNA
DGSQDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRL
VTKNSIEENIIERAKQKMVLDHLVIQSMDTSGRTVFNKKMSSSNSNPFNREELNAILKFG
AEELFKDDEENEEEPMCDIDEILRRAETRDEAPSMASDELLSAFKVASFNLDEEEEVSKL
DSVDESTKDWDEIIPEDFRTKIDEEEKQKEMADLYLPPRKRKTVNQAGQKEDESPRAKKK
RQDSESSNDDTDDDKPRKRGRPRMHHKETIKGFTDAEVRRFFKSFKKFSNPLRRLDTIAH
DADLREKPISDLRKVGETIYERCQDAMKEHESQKENEKAPEVNGQPKQRRDRGPSFKLSG
VAINAKTTLATLEELAPLDHIVPHAPVERASWTLQMKRVKDAHWDVPWGIQDDSRLLRGI
YEYGMGSWEQIKGDPALNLDDKILLGGETKPQGKHLESRAQYLLKLIKKQMGLGPTKQLS
QQAKIHKPLKLRKTKEPKGISKAIIENDDSSDDEKNTSQLSGVSLKKAPKVNEEPKEHKD
SKESKSKARDIKEEKEDGEKAKVKEENDAKEEKPKKKKEKKEKKEKKEKDKKADGPMHIT
ANGEPIPLDDSKELDKTHPLWDECKEKMRPMKRALKTLDNPNESLTQEEQIQQTRRCLIQ
IGDHIERCLENIKDPESLKEWKSLLWQFVSKFTEYDSKKLHKLYKKNKKIQEEKKEADKD
KDHDKDKKDDKRDKKHEKEHDKKRDKGGSGGGGEGGGSGDKHHDKKRKMEESGAHSPSKK
PYNGWGPRGREGDKWSDRDKSRDRDRDRDRSDRDRPRDRDRDRDRNYPRNHPGPGREWHN
SPGGRDFKER
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgattgaggtcgactggacacagacacagcccaaagaagaagatgagaatgtgcagacc
attgagaaggttctggagcacagggtcggcaaaaagggagctgtgggtatgcagacctac
ttatacgaggtggagaagaatggggaccctaacgcagactttgatcccaacgaccctgag
caggtggagacacagtacctgataaaatggaagggctgggcacacctccacaacacctgg
gagtcggaggagtcgctcaaaacacagaagtacaatgcattccaggtgaaaggcatgaag
aagctggagaactacctgcgcagggaggaggagatggccatttggaggcaccgcgcatcc
ccagaggaggtcgagtacatggagatccagtcggagctcgagaaggagctctatgtgtcg
cacgttagagctgagaggatctttgctgaagcagaggaaaatggcaaccattattactac
atgaaatgggaaaatctcccctatgcagaggccacgtgggaactcgaatccttagttcga
gaaagatttattgaacaacttgagagttttgaagtgcgggaaaagtcatcttgcacccca
aagcagtgccctgcactgaaacacagaccaaagttctcggcaatgaaagtccagcccgat
tatttgggaggcgcaaatgagaatctagaattacgtgattaccagatggatggagtcaac
tggctcattcatgcttggtgcaagcacaactctgtcatacttgctgatgagatgggtctg
ggtaaaaccatccagactataagttttctgagctaccttttccatacacacgccatgtat
ggtcccttcctcctagtcctaccactctccaccctgaatgcatggcagcgggaattccac
aactgggctccagacattaacgtcattgtttacatcggtgacagggactccagaagaatt
gtgagagattatgagtggacaacctcctccaaaaggctcaagttcaatgctgttctcaca
acctatgagattcttttacgtgataaagaagacctgagagacagctgtcagtgggcttgt
ctggtggttgatgaggcacataggctcaagaatgaggagtctcagctgtaccaggcactg
aaggagttccgctccaaccaccgtttgctcatcactggcacacccctccagaactctctc
aaggagctgtgggccctcctgcacttcattatgcctgagaagtttgacgactgggactac
tttgagtcacagcatgacagtgagaacatgaggaagggtttccaccgccttcataagcag
ctagagcccttccttctgcgtcgtgtcaagaaggacgtggagaagtccctccctgcaaag
gtggagcaaatcctcagggtggacatgatgcagcagcagaagcagttctacaagtggatt
ctcaccaagaattatgacatgctcaaaaaagggaacaggggttcaacttcaagttttgta
aatattgtgatggagttgaagaaatgctgcaaccacagtcacctcattaaacctgctgaa
gatactatatcaacagagattctgccggctttattaagaggcagcgggaagttaatgctg
ttggacaagcttttggttaggctgcgggaaacggggcacagagtcctcatcttctcccag
atggtgcgcatgctggacatcttggcgcagtacctgcagtaccgccgcttccccttccag
aggctggatggctccatcaagggtgaactcaggaggcaggcactcgatcacttcaatgct
gatggttctcaggatttctgtttcctcctgtccacccgtgccggaggccttggaatcaac
ctcgctacggcagataccgtcgtcatttttgactcggattggaatccccaaaatgatctg
caagcgcaagcaagagcacatcgaataggtcagaaaaatcaggttaatatttatcggctg
gtgacgaaaaatagtatagaagaaaatattattgagcgcgcgaaacagaagatggttctc
gatcatcttgttatccagtccatggacacttctggtcgcactgtcttcaataaaaaaatg
tctagctcaaattctaacccattcaaccgcgaggagttgaatgccatcctaaagtttggt
gcagaggaactttttaaagatgacgaggagaatgaggaggagccaatgtgtgatatagat
gaaatcctcaggagagctgagacgagggacgaggctccgtccatggccagtgatgagctc
ttgagcgcattcaaagtggcttcctttaatctagatgaagaggaggaagtctccaagctt
gactccgttgatgagagcaccaaagactgggatgaaattatcccagaggatttccgaacc
aaaattgatgaagaggagaagcaaaaagaaatggctgacctctacctgcccccaagaaaa
cggaagacggtgaatcaggcaggacagaaggaagatgaatctcctcgagccaagaagaaa
cgccaggactctgaatcaagcaatgacgatacagatgatgacaaaccaagaaagcgaggt
cggcctcgcatgcaccataaagagaccattaaaggttttactgatgcagaggtcagaaga
ttcttcaagagcttcaaaaagttcagcaatcccttacgacgtctcgacactattgctcac
gatgctgatctccgagagaagcccatcagcgacctgcgcaaagtgggcgagacaatatat
gagaggtgccaggatgctatgaaggagcacgagagtcagaaagagaatgaaaaggcacct
gaagttaatggccaacccaaacaacgcagagacagaggaccatcgttcaagctctctggg
gtggctatcaatgccaaaaccacactggcaaccttagaggagctagcacccttggaccac
atcgtacctcacgcaccagttgagcgagcgtcgtggaccctgcagatgaagcgggtcaaa
gatgcccactgggatgtaccttggggcatccaggatgattccaggttactacgtggtatt
tacgagtatggaatgggatcttgggaacaaatcaagggagatccagcccttaacctcgac
gacaaaatcctccttgggggtgagaccaagcctcagggtaaacatttagagagcagagca
caatacttacttaaactaatcaagaaacagatgggtcttggaccaacaaagcagctctct
caacaggccaagatccacaagcctctcaaacttcgaaagaccaaggaaccaaagggcata
tcaaaagccatcattgaaaacgacgacagctctgatgacgaaaagaatacctcgcagttg
tcaggagtgagccttaaaaaggctcctaaggtgaatgaagagcccaaggaacacaaagac
tccaaggaaagcaagtcgaaagcacgggacatcaaggaggagaaggaggatggtgagaag
gccaaagtaaaggaggaaaacgatgccaaggaggagaaaccaaagaagaagaaggagaaa
aaggagaagaaagagaagaaggagaaggacaagaaggccgacggaccgatgcacatcact
gccaatggagagcccattccgctggatgacagtaaagagcttgacaagacgcacccactt
tgggacgagtgcaaagagaagatgagaccgatgaagagagcactaaagacccttgacaac
cccaacgaaagcctgacgcaagaagaacaaattcaacagacacgacgctgtctcatccaa
ataggagatcacattgagcgctgtttagagaacatcaaggatcctgagagtttgaaagaa
tggaaaagcctgctgtggcagtttgtctccaagtttacagagtatgattccaaaaagttg
cacaagctttataagaagaacaagaagattcaagaagagaagaaagaggctgacaaggac
aaggaccatgataaggataagaaggatgataaacgagacaagaaacatgagaaggagcac
gacaaaaagcgtgataagggaggcagtggtggagggggcgaaggaggagggagcggagac
aagcaccatgacaagaagcgcaaaatggaggagagtggtgcacacagtccttcaaagaaa
ccttataacgggtggggaccgagagggcgcgaaggggacaagtggagtgaccgggataag
agtcgagaccgagaccgcgacagggaccgttcggatcgggaccgaccccgagaccgcgac
agggaccgagaccgcaactatccacgcaaccatcctggccctgggagagagtggcacaac
agccctggggggagagacttcaaagagaggtga
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integrated database retrieval system
