Penaeus chinensis (fleshy prawn): 125048343
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Entry
125048343 CDS
T08118
Name
(RefSeq) 3'-5' exoribonuclease 1-like
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125048343
03036 Chromosome and associated proteins [BR:
pchn03036
]
125048343
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
125048343
Chromosome and associated proteins [BR:
pchn03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
125048343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
SAP
Motif
Other DBs
NCBI-GeneID:
125048343
NCBI-ProteinID:
XP_047502965
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All DBs
Position
4:16122134..16135727
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AA seq
430 aa
AA seq
DB search
MIKRTKTRGNEEGKETKKAPVLKFSDTQLIASGAASHRNVFSALADSSVEMIDVDIGGDQ
SGEDVEMEEPNNSQDEKSNHENPVFRELAVINGKINRMSNDELRQKLRSLRLDQRGNREV
RKNRLKSYYRTEKLEEAYKEDPQIELYKYFDYYVVIDFEATCDAGNSQTYRHEIIEFPAM
LVDTSKSKIIEEFHSYVRPVINPKLTEFCTCLTGITQELVNYAPEFPEVLKKFEEWLKEH
NLLQKSGRFAVVTDGPWDMGRFMYLQCKISNLPFPKWCRQWINIRKTYSNFYNSKRVRIC
LKDMLSTLGMRFEGKPHCGRDDAYNIARIAMRLLRDGANMRLNEEISTSERYSDIPGMTM
VRNITRQSFLARRNASPKKTKGNKMNIKEDNENKDSQMITDNEISKELRPVREIDHRNED
EFPDLLKSNT
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagaggacaaaaactcgtggaaatgaagagggcaaggaaaccaaaaaggctcca
gttcttaagttttcagacacgcagctgattgcgtcgggtgcggccagccatcgaaatgta
tttagtgctcttgcagacagttctgttgaaatgattgatgttgatatcgggggagatcaa
agtggtgaggatgttgaaatggaagagcccaacaatagccaagatgaaaaatccaatcat
gagaatcctgtctttcgagaattagccgtcatcaatggaaagattaatcgcatgagcaac
gacgaactgagacagaaactccgttccctcagactggaccagagaggaaacagagaagtc
cgcaagaataggctaaagtcgtattacagaacagagaagttggaggaggcgtacaaggaa
gaccctcaaattgagctgtacaaatactttgactattatgtagtcatcgattttgaagcc
acatgtgatgcaggaaattcacagacttatagacatgagatcatagaatttccagcaatg
cttgtagataccagcaagagcaaaataattgaggagttccactcatatgttcggccagtc
atcaacccaaaacttactgaattttgcacatgcctaactggaataacccaagaacttgtg
aattatgcaccagagttccctgaagtcctaaagaagtttgaagagtggttgaaagagcac
aacctgctgcaaaagtctggcagatttgcagtggtgactgatggaccctgggacatgggg
aggtttatgtatctacagtgcaagatatctaatttgccatttcctaaatggtgccgacag
tggatcaatatcaggaaaacctatagcaatttttataactccaaaagagtaaggatatgt
ctaaaagacatgttaagtacgttgggaatgagatttgaaggcaaaccacactgtggccgt
gatgatgcatataatattgctcgtattgctatgagacttttgagagatggggcaaacatg
agactgaatgaagaaatttctacaagtgaaagatacagtgatataccaggaatgaccatg
gtgaggaacataacccggcaaagcttcttggcaaggagaaatgcaagtccaaagaaaacg
aaaggaaataaaatgaacataaaagaggataacgaaaacaaagattcacaaatgataact
gacaacgaaatttcaaaggagttgagacctgttagggaaattgaccacaggaatgaagat
gaatttcctgatttactgaaaagcaacacctaa
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