Pseudomonas chlororaphis subsp. piscium: C4K32_0002
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Entry
C4K32_0002 CDS
T09060
Name
(GenBank) DNA polymerase III beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Pathway
pchp03030
DNA replication
pchp03430
Mismatch repair
pchp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C4K32_0002
03430 Mismatch repair
C4K32_0002
03440 Homologous recombination
C4K32_0002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pchp03032
]
C4K32_0002
03400 DNA repair and recombination proteins [BR:
pchp03400
]
C4K32_0002
Enzymes [BR:
pchp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C4K32_0002
DNA replication proteins [BR:
pchp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C4K32_0002
DNA repair and recombination proteins [BR:
pchp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C4K32_0002
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
TubC_N
Motif
Other DBs
NCBI-ProteinID:
AZC66702
LinkDB
All DBs
Position
1560..2663
Genome browser
AA seq
367 aa
AA seq
DB search
MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVQLE
EPAEPGEITVPARKLMDICKSLPNDALIDIKVDEQKLVVKAGRSRFTLSTLPANDFPTVE
EGPGSLTCQLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSAGIIRAVATDGHRLAMC
SMQADIGQPDRHQVIVPRKGILELARLLTEPDGNVSIVLGQHHIRATTGEFTFTSKLVDG
KFPDYERVLPKGGDKLVLGDRQALREAFSRTAILSNEKYRGIRLQLANGQLKIQANNPEQ
EEAEEEVGVEYNGGSLEIGFNVSYLLDVLGVMTTEQVRLILSDSNSSALVQESDNDDSAY
VVMPMRL
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcaccattcaacgcgaagccctgttgaaacccctgcaactggtcgccggcgtc
gtcgaacgtcgtcagaccttgccggtactttccaacgtgctgttggttgtcgaaggccag
caactgtcgctgaccggtaccgacctggaagtcgagctggtcggtcgcgtgcagctggaa
gagccggcggagccaggcgaaatcactgtcccggcgcgtaagctgatggacatctgcaag
agcctgccgaacgatgccctgatcgacatcaaggtcgatgagcagaagctggtggtcaag
gctggccgtagccgctttaccctgtccaccttgccggccaacgatttcccgactgtggaa
gaaggcccgggctcgctgacctgccagctggagcagagcaagctgcgtcgcctgatcgaa
cgcaccagcttcgccatggcccagcaggacgtgcgctactacctcaacggcatgctgctg
gaagtctccgccggcatcatccgtgccgtggccaccgacggtcaccgcctggcaatgtgc
tcgatgcaggccgatatcggtcagccggatcgccaccaggtgatcgtgccgcgcaagggc
atcctggaactggcccgcctgctcaccgagccggacggcaatgtcagcatcgtgctgggt
cagcaccacatccgtgcgaccaccggcgagttcaccttcacttccaagctggtcgacggc
aagttcccggactacgagcgcgtgctgccgaagggcggtgacaagctggtgctgggcgac
cgtcaggcgctgcgcgaagccttcagccgtaccgcgatcctgtccaacgagaagtaccgc
ggtatccgtctgcaactggccaacggtcagctgaaaatccaggccaacaacccggagcag
gaagaggcggaagaagaagtaggcgtggaatacaacggcggttcgctggagatcggcttc
aacgtgagctacctgctcgacgtgctgggcgtgatgaccaccgaacaggtacgcctgatc
ctgtccgattccaacagcagtgcgctggtgcaggaatccgacaacgacgactcggcctac
gttgtcatgccgatgcgcctgtaa
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