Pseudomonas chlororaphis subsp. piscium: C4K32_0292
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Entry
C4K32_0292 CDS
T09060
Name
(GenBank) Transcription accessory protein (S1 RNA-binding domain)
KO
K06959
protein Tex
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
C4K32_0292
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
S1_RRP5
YqgF
HHH_7
T2SSK
HHH_6
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AZC66985
LinkDB
All DBs
Position
complement(321228..323552)
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AA seq
774 aa
AA seq
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MDSINSRIAEELGVRPQQVEAAVALLDEGSTVPFIARYRKEVTGSLDDTQLRHLEERLRY
LRELDERRISILASIEEQGKLTPELARDIKLADTKTRLEDLYLPYKQKRRTKGQIALEAG
LGELADGLFNDPGLTPESEAARFVDAEKGVADVKAALEGAKYILMERFAEDASLLDKLRN
YLKQEATLSARVIAGKEEEGAKFRDYFEHDEPLKSMPSHRALAIFRGRNEGILSSALKVG
DELPGTMHPCEGMIGQQVGIQNQNRPADKWLGEVVRWTWKVKLYTHLETDLLGELRDSAE
TEAINVFAHNLHDLLLAAPAGPRATLGLDPGLRTGCKVAVVDATGKLLDHATVYPHVPHN
KWDQTIAVLAALCAKHSVDLVAIGNGTASRETDKLAAELIKKYPAMRMTKVMVSEAGASV
YSASELAAKEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG
LDAVVEDCVNAVGVDVNTASVALLARISGLNTTLAQNIVSHRDENGAFKTRAALKKVARL
GEKTFEQAAGFLRVMNGDNPLDASAVHPEAYPLVQRIAAETDRDIRSLIGDSGFLKRLDP
KKFTDETFGLPTVTDILQELDKPGRDPRPEFKTAEFQEGVEDLKDLQLGMILEGVVTNVT
NFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMS
DTPGEKIDGARGSRPGSAPRSSGNSAPRKESVAAAPTNNAMASLFANAKQLKKR
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggacagcatcaacagccgcattgccgaggaactcggtgtacgcccacaacaggtcgaa
gcggccgtcgctctattggatgaaggctccaccgtgcccttcatcgcccgctaccggaag
gaagtgaccggcagcctcgatgacacccaactgcgtcatctggaagagcgcctgcgctac
ctgcgagaactcgacgaacggcgcatcagcatcctcgccagcatcgaggagcagggcaaa
ctgaccccggaactggcccgcgacatcaagctcgccgacaccaagacccgcctcgaagac
ctctacctgccgtacaagcagaagcgccgcaccaagggccagatcgccctggaagccggc
ctcggcgaactggcggatggcctgttcaacgacccgggcctgacccctgaaagcgaagcc
gcgcgcttcgtcgacgcggaaaaaggcgtggccgatgtgaaggccgccctcgaaggcgcc
aagtacatcctcatggagcgcttcgccgaagacgccagcctgctggacaagctgcgcaac
tacctcaagcaggaagccaccctcagtgcccgcgtgatcgccggcaaggaagaggaaggc
gccaagttccgcgactacttcgaacacgacgaaccgctgaagagcatgccgtcacaccgc
gccctggcgattttccgtggccgcaacgaaggcatcctcagctccgcgctgaaagtcggc
gacgaactgccgggcaccatgcacccgtgcgaaggcatgatcggccagcaggtcggcatc
cagaaccagaaccgcccggcggacaaatggctcggcgaagtggtgcgctggacctggaag
gtcaagctctacacccacctggaaaccgacctgctgggcgagctgcgcgacagcgcggaa
accgaggcgatcaacgtcttcgcccacaacctgcacgacctgctgctggccgcgccggcc
ggcccgcgcgcgaccctgggcctcgacccgggcctgcgcaccggctgcaaggtggcggtg
gtggatgccaccggcaagctgctggaccacgccaccgtttacccccacgtaccgcacaac
aagtgggaccagaccatcgccgtgctggccgcgctgtgcgccaagcactcggtggacctg
gtcgccatcggcaacggcaccgccagccgtgaaaccgacaagctggccgccgagctgatc
aagaaatacccggccatgcgcatgaccaaggtcatggtctccgaggcgggtgcttcggtg
tactcggcgtcggaactggccgccaaggaattccctgatctcgacgtatcgatccgtggc
gcggtgtccatcgcccgccgcctgcaggacccactggccgagctggtgaagatcgatccg
aaatccatcggcgtcggccagtaccagcacgacgtgtcgcagctgaagctggctcgtggc
ctggatgcggtggtcgaggactgcgtgaacgccgtcggcgtggacgtcaacaccgcctcg
gtggccctgctggcgcggatctccggcctcaacaccaccctggcgcagaacatcgtcagc
caccgcgatgaaaacggtgcgttcaagacccgcgccgcgctgaagaaggtcgcccgcctg
ggtgaaaagaccttcgaacaggccgccggcttcctgcgtgtgatgaacggcgacaacccg
ctggacgcatccgcggtgcacccggaagcctacccgctggtgcagcgcatcgccgccgag
accgatcgcgacatccgttcgctgatcggcgacagcggcttcctcaagcgcctggatccg
aagaagttcaccgacgagaccttcggcctgccgaccgtcaccgacatcctccaggaactg
gacaagcccggccgcgacccacgccccgagttcaagaccgccgagttccaggaaggcgtc
gaagacctcaaggacctgcaactggggatgatcctcgaaggcgtggtgaccaacgtcacc
aacttcggtgccttcgtcgacatcggcgtgcaccaggacggtctggtgcacatctcggcg
ctgtcggagaagttcatcaaggacccgcgtgaagcggtgaaggccggcgacgtggtcaag
gtcaaggtcatggaagtcgacattccgcgcaaacgcgtcggcctgtcgatgcgcatgagc
gacaccccaggcgagaagatcgacggcgctcgtggttcgcgcccaggctccgcaccgcgc
tcgtcgggcaacagcgccccgcgcaaggaaagcgtggccgcggcgccgaccaacaacgcc
atggcatcgctgttcgccaacgccaagcagttgaagaaacgctga
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