Pseudomonas chlororaphis subsp. piscium: C4K32_0367
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Entry
C4K32_0367 CDS
T09060
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Pathway
pchp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C4K32_0367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchp03400
]
C4K32_0367
Enzymes [BR:
pchp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
C4K32_0367
DNA repair and recombination proteins [BR:
pchp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C4K32_0367
Prokaryotic type
C4K32_0367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
YqhI
HHH_5
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
AZC67058
LinkDB
All DBs
Position
complement(398088..399155)
Genome browser
AA seq
355 aa
AA seq
DB search
MRAEQFAPAVLDWYDRHGRHDLPWQQEINPYRVWVSEIMLQQTQVSTVLNYFDRFMASLP
TVQALAAAPEDEVLHLWTGLGYYTRARNLQKTAKIVVAEYGGEFPRDVEKLTELPGIGLS
TAGAIASISMSLRAPILDGNVKRVLARFTAQEGYPGEPKVAKQLWAAAERFTPQTRVNHY
TQAMMDLGATLCTRSKPSCLLCPLERGCEAHMLGLETRYPIPKPRKAVPQKRTLMPMLTN
HEGAILLYRRPSSGLWGGLWSLPELDDLADLEHLASQHSLELGKQQEMPGLVHTFSHFQL
AIEPWLVEVQAAAHHVAEADWLWYNLATPPRLGLAAPVKKLLKRAADVLNAGELQ
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagggccgagcagttcgcaccggcggtactggactggtacgaccgccatggccgccat
gacctgccctggcagcaggagatcaacccgtaccgggtatgggtctcggaaatcatgttg
cagcagacccaggtcagcaccgtgctcaactacttcgaccggttcatggcctcgctgccg
acggtccaggccctggccgccgcgccggaagacgaagtgctgcacctgtggaccggcctg
ggttactacacccgcgcccgcaacctgcaaaagaccgcgaagatcgtggtcgccgaatac
ggcggcgagtttccccgcgacgtggaaaagctcaccgagctgccgggcatcggcctgtcc
accgccggcgccatcgccagtatcagcatgagcctgcgcgcgccgatcctcgacggcaac
gtcaagcgggtgctggcgcgctttaccgcgcaggagggctacccgggcgaacccaaggtg
gccaagcagctgtgggccgcggccgagcgctttaccccgcagacccgggtgaaccactac
acccaggcgatgatggacctgggtgccaccctctgcacccggagcaagcccagctgcctg
ctgtgccccctggaaagaggctgcgaagcgcacatgctgggcctggaaacccgctacccg
atccccaagccacgcaaggccgtcccgcagaaacgcacgctgatgccgatgctgaccaac
cacgaaggcgccatcctgctgtaccgccggccctccagcggcctgtggggcggtttgtgg
agcctgccggagctggacgacctggcggacctggaacacctggcttcgcagcactcgctg
gagctaggcaagcaacaggaaatgcccggcctggtgcacaccttcagtcacttccagctg
gccatcgagccctggctggtagaggtccaggcagccgcccatcacgtggccgaggccgac
tggctctggtataacctcgccaccccgccgcgcctgggccttgccgccccggtgaaaaaa
ctgctcaaacgcgcggccgacgtattgaacgcaggagagttgcaatga
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