Pseudomonas chlororaphis subsp. piscium: C4K32_0533
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Entry
C4K32_0533 CDS
T09060
Name
(GenBank) Lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Pathway
pchp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4K32_0533
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pchp02000
]
C4K32_0533
Enzymes [BR:
pchp01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
C4K32_0533
Transporters [BR:
pchp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
C4K32_0533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
ABC_ATPase
AAA_29
DEAD
RsgA_GTPase
AAA_30
NB-ARC
nSTAND3
nSTAND1
AAA_33
DUF815
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AZC67224
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Position
589257..591065
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AA seq
602 aa
AA seq
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MSDAPPKAEQDSSLKIYFRLLGYVKPYIGIFLLSIVGFVIFASTQPMLAGILKYFVDGLS
NPEAVLFPNVPYLRDLQLLMAVPLLIILIAAWQGLGSFLGNYYLAKVSLGLVHDLRVQLF
NKLLVLPNRYFDTHNSGHLISRITFNVTMVTGAATDAIKVVIREGLTVVFLFVYLLWMNW
KLTLVMLAILPLIAVMVGSTSKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGESY
EQQRFVDASQSNTDKQLRMTKTGAVYTPMLQLVIYSAMAVLMFLVLFLRGDATAGDLVAY
ITAAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDVEPEVDRGQVERERIEGRLDVRNL
SFTYPGTDREVLKDISFSAAPGQMIALVGRSGSGKSTLASLIPRFYHHETGQILLDDVEI
EDYRLRNLRRHVAQVTQHVTLFNDSVAANIAYGDLAGAPREDIEKAAADAYAMDFISQLP
EGLDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDKVM
KGRTTLVIAHRLSTIEKADLILVMDQGRIVERGTHVDLLAQNGYYSRLHAMGLDEPASEG
IA
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgcaccgcccaaagcggaacaggattccagcctgaaaatctatttccggctg
ttggggtatgtaaaaccctacataggcattttcctgctgagtatcgtgggcttcgtgata
tttgcttccacccagccgatgctggcgggcattctcaaatatttcgtcgacggcttgagc
aatcccgaagcggtgctcttccccaacgttccctatctgcgcgacttgcagctattgatg
gcggtgccgctgctgatcatcctgatcgcggcctggcaggggctcggctccttccttggc
aactattacctggcgaaggtttccctgggactggtgcatgacctgcgggtccagctgttc
aacaagctgctggtcctgccgaaccgttatttcgatacccataactccgggcatctgatt
tcccgcatcaccttcaacgtcaccatggttaccggtgccgccaccgacgccatcaaggtg
gtgattcgcgaaggcctgacagtggtgttcctgttcgtctacctgctgtggatgaactgg
aaactgaccctggtgatgctggcgatcctgccgttgattgcggtcatggtcggcagcacc
agcaagaaattccgcaagcagagcaagaagatccaggtggcgatgggcgatgtgacccac
gtggcctccgagaccattcaaggctatcgcgtggtgcgcagcttcggtggcgaaagctac
gagcagcagcgtttcgtcgacgccagccagagcaacaccgacaagcagctgcgcatgacc
aagaccggtgcggtctacacgccgatgctgcagttggttatctactccgccatggcggtg
ctgatgttcctggtgctgttcctgcgtggcgatgccaccgcaggtgacctggtggcctat
atcaccgcggcgggccttctgcccaagccgattcgccagctctcggaagtcagttcgact
atccagaaaggcgtggcgggcgcggaaagcatcttcgagcagctggatgtcgagcctgaa
gtcgatcggggccaggtcgagcgtgagcgtatcgagggtcgcctcgacgtgcgcaacctg
agcttcacctatccgggcaccgaccgtgaagtgctgaaggacatcagcttctccgcggct
cccggccagatgatcgcgctggtcggtcgctccggcagcggcaagtcgaccctggccagc
ctgattccacgcttctatcaccacgaaacggggcagattctcctcgatgacgtggagatc
gaggattaccgcctgcgcaacctgcgccggcatgtggcccaggtgacccagcatgtaacc
ctgttcaacgacagcgtggccgccaacatcgcctatggcgacctggccggggcgccgcgg
gaagatatcgagaaggcggcggcggatgcctatgccatggacttcatttcgcagctgccc
gaaggcctggacacccaggtcggcgagaacggcgtgctgctctccggcggccagcgccag
cgtctggcgattgcccgggccctgttgaagaatgcgccgttgctgattctcgacgaggcc
acctcggccctggatactgaatccgagcggcatatccaggcggccctggacaaggtgatg
aaggggcgcaccaccctggtgatcgcgcaccgcctgtcgaccatcgagaaggccgacctg
attctggtcatggaccaggggcggatcgtcgagcgcggcacccatgtcgacctgctggca
cagaacggctactactcgcgcctgcatgccatgggcctggacgagccagcttccgaaggc
attgcctga
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