Pseudomonas chlororaphis subsp. piscium: C4K32_0802
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Entry
C4K32_0802 CDS
T09060
Name
(GenBank) Inner membrane protein YfiN
KO
K21021
diguanylate cyclase [EC:
2.7.7.65
]
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Pathway
pchp02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
C4K32_0802
Enzymes [BR:
pchp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
C4K32_0802
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GFIT
Motif
Pfam:
GGDEF
CHASE8
HAMP
DUF7801
SMP_2
sCache_3_2
Cadherin_C_2
Motif
Other DBs
NCBI-ProteinID:
AZC67486
LinkDB
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Position
868980..870248
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AA seq
422 aa
AA seq
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MSFFKSPARPTLRSVIGRGHLIVALLAISMASLSLTLLGVLALRVYADHNLHLIARSINY
TVEAAVVFNDSAAATEALALIASTEEVADAQVLDARGRVLAHWERPETGLLTDLEMQIAR
AFLEKPITVPIMHQGQEIGSIALTGHGGSLLRFLLSGLVGIVLCIAVSAWVALYLARRQL
RGITGPLRSLADVAHAARRERAFDVRVPPAEIAELDNLGNDFNALLDELEAWQTHLQSEN
ETLAHQASHDSLTGLPNRAFFEGRLIRALRSASKLNERVAVLFLDSDRFKGINDNFGHAA
GDAVLMAVASRVRAQLREEDLVARLGGDEFAILLTPLHRIEDAERIAEKIIASMEMPIAL
PGSTSVLTSLSIGIAVYPDHGTTPGALLNAADAAMYQAKRVSRGGQHTAGSEPPVVHVQS
RS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcttcaagtcgcctgctcgccctacattgcgttcggtcattggccgcgggcat
ctgattgtcgccctgctggccatttccatggccagcctgtccctgacattgctcggggtg
ctggcgttgcgggtgtatgccgatcacaacctgcacctgatcgcgcgttcgatcaactac
acggtcgaggcagcggtggtgttcaacgacagcgccgcggcgaccgaggccctggccctg
attgcctccaccgaagaggtggccgatgcccaggtactcgacgcccggggccgcgtgctg
gcccactgggagcggccagaaaccggtttgctgaccgatctggaaatgcagatcgcccgc
gcctttctcgagaagcccatcacggtgccgatcatgcatcagggccaggaaatcggcagc
atcgccttgaccgggcacggcggcagcctgctgcgcttcttgctcagtgggctggtgggg
attgtcctgtgcatcgcggtgagtgcctgggtggcgctgtacctggcgcgccgtcagttg
cgcggcattaccgggccgctgcgcagcctggccgatgtggcccatgccgcgcgccgcgag
cgggcattcgacgtacgggtgccgccggcggaaattgccgagctggacaacctgggcaac
gacttcaatgccctgctcgatgagctggaagcctggcaaacccatttgcagagtgaaaac
gaaaccctggcccaccaggccagccacgacagcctgaccgggttgccgaaccgggcgttt
ttcgagggccggctgatccgcgcattgcgcagcgccagcaagctcaacgaacgggtggcg
gtgctgtttctcgacagcgaccgcttcaagggcatcaacgacaacttcggtcacgccgcc
ggcgatgcggtgctgatggcggtggcgtcgcgggtgcgggcacagttgcgcgaggaagac
ctggtggcgcgcctggggggcgacgagttcgccattttgctgaccccgctgcaccgcatc
gaggacgccgagcgtatcgccgaaaaaatcatcgccagcatggagatgccgattgccttg
ccaggcagtacttcggtactgacttcgctcagtatcggtattgccgtctaccctgatcat
ggcaccaccccgggtgctctgctcaacgccgccgatgcggcgatgtatcaggccaagcgt
gtctctcgaggcgggcaacacactgcggggtcggagccccccgtcgttcacgttcaatcc
aggagctaa
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