Pseudomonas chlororaphis subsp. piscium: C4K32_0889
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Entry
C4K32_0889 CDS
T09060
Name
(GenBank) Transcription termination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchp03021
]
C4K32_0889
03009 Ribosome biogenesis [BR:
pchp03009
]
C4K32_0889
Transcription machinery [BR:
pchp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
C4K32_0889
Ribosome biogenesis [BR:
pchp03009
]
Prokaryotic type
rRNA transcription factors
C4K32_0889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
KH_2
RNA_pol_A_CTD
DUF507
DUF2187
Motif
Other DBs
NCBI-ProteinID:
AZC67571
LinkDB
All DBs
Position
960923..962404
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AA seq
493 aa
AA seq
DB search
MSKEVLLVVESVSNEKGVPASVIFEALELALATATKKRFEDEVDLRVEINRHTGAYETFR
RWTVVEEADLDDPAVETWPSKVQETHPGAKVGDVVEEKIESIEFGRIAAQTAKQVIVQKV
REAERAQVVDAYRERLGEIISGTVKKVTRDNVIVDLGNNAEALLAREDIISRETFRVGVR
LRALLKEIRTENRGPQLILSRTAPEMLIELFRIEVPEIAEGLIEVMAASRDPGSRAKIAV
RSKDKRIDPQGACIGMRGSRVQAVSGELGGERVDIVLWDDNPAQFVINAMSPAEVAAIIV
DEDAHAMDIAVGADNLAQAIGRGGQNVRLASQLTGWTLNVMTESDIQAKQQAETGDILRN
FIEELEVDEELAQVLVDEGFTSLEEIAYVPLEEMLNIDGFDEDIVNELRARAKDRLLTKA
IATEEKLADAHPAEDLLSLEGMDKDLAMELAVRGVITREDLAEQSIDDLLDIDGIDDDRA
GKLIMAARAHWFE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaagtactgctggttgttgagtcggtatccaatgaaaagggtgtaccggca
agcgtaatttttgaagcgctggagctggccctggccactgctaccaaaaagcgtttcgag
gacgaagtcgatctgcgtgtggaaatcaatcgccacaccggtgcttacgagactttccgt
cgctggacggtagtcgaggaagccgatctggacgatccggctgtggaaacctggccgagc
aaggtccaggaaacccatccgggcgccaaagtcggtgatgtcgtcgaggaaaagatcgaa
tcgatcgagttcggccgcattgctgcgcagaccgccaaacaggtcatcgtgcagaaagtc
cgcgaagccgagcgcgctcaagtcgttgacgcttaccgcgagcgcttgggtgaaattatc
tccggcactgtgaaaaaagtgactcgcgacaacgtgatcgtcgacctgggtaacaacgcc
gaagcgctgttggcccgtgaagacatcatttcccgcgagactttccgggttggcgtgcgt
cttcgcgcgctgctcaaggaaatccgcaccgagaaccgcggcccgcagctgatcctgtcg
cgtaccgcgccggaaatgctgatcgagctgttccgtatcgaagtgccggaaatcgccgaa
ggcctgatcgaagtcatggccgcttcccgtgatccgggttcgcgcgccaagattgcggtc
cgttccaaagacaagcgcattgaccctcagggtgcgtgcattggtatgcgcggttcgcgc
gtccaggccgtttccggtgagttgggcggtgagcgtgtggatatcgtcctgtgggacgac
aacccggcgcagttcgtgatcaacgccatgtcgccggccgaagtcgcggcaattatcgtc
gacgaagatgcccatgccatggacatcgccgttggcgcagacaatctggctcaggccatc
ggtcgcggtggtcagaacgtgcgtctggccagccagttgactggctggaccctgaacgtg
atgaccgaatcggacatccaggctaagcagcaagctgaaaccggcgacatcctgcgcaac
ttcatcgaagagctggaagtcgatgaagagctggcacaggtgctggttgatgaaggcttc
accagcctggaagagattgcctacgtaccgttggaagaaatgctcaacatcgacggcttt
gacgaagacatcgtcaacgagcttcgcgctcgtgccaaggatcgcttgttgactaaagcc
atcgctactgaggaaaagctggcagacgcccatccggccgaagacctgctctcgcttgag
ggtatggacaaggatttggcgatggaactggcggtgcgcggcgtaattacccgcgaagac
ctggccgagcagtctattgacgacctgctcgacatcgacggcattgacgatgatcgtgcc
ggcaagttgatcatggccgcccgagcccattggttcgagtaa
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