Pseudomonas chlororaphis subsp. piscium: C4K32_0892
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Entry
C4K32_0892 CDS
T09060
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pchp03016
]
C4K32_0892
Enzymes [BR:
pchp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
C4K32_0892
Transfer RNA biogenesis [BR:
pchp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C4K32_0892
Prokaryotic type
C4K32_0892
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
AZC67574
LinkDB
All DBs
Position
965503..966420
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AA seq
305 aa
AA seq
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MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLMQLGKTTTTADAEGEVLQTREVTVGRADIEAVLPEFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREARSVTIARLELLAFEGDTARLAVDCSKGTYI
RTLVEDIGEKLGCGAYVAELRRTQAGPFSLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLQFSEHSAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaagcgtatccgtcgtaacgtcagcggtatcatcctgctcgacaagccg
ctggggttcacctccaacgcggcgctgcagaaagtccgttggttgctcaatgccgaaaag
gccgggcacaccggcagcctcgatcccctggccaccggcgtgctgccgttgtgctttggc
gaggcgaccaagttctcgcaatacctgctcgattccgacaagggttacgaaaccctgatg
cagttgggcaagaccaccaccacggccgatgccgagggtgaagtcctgcagactcgcgaa
gtgaccgttggtcgcgccgatattgaagcggtgttgccggaatttcgcgggcaaatcagc
cagataccgccgatgtactcggccctcaagcgtgatggccagccactttacaagctggcc
cgtgcaggcgaagtggtggagcgcgaagcgcgttctgttactattgcgcgcttggaatta
ctggcctttgaaggcgatactgcgcggctagcggtggactgcagtaaaggcacctatatc
cggaccctggtggaggatatcggtgagaagctgggttgtggtgcttacgtcgcggaactg
cgtcgcacccaggccggtcctttcagtctggcccagaccgtcacgctggaagagcttgaa
gcggtacatgccgaaggcggcaacgaagcggtggatcgcttcctgatgccatcggacagc
ggcctgctggattggccactgctgcagttctcggagcacagcgcgttctactggctcaac
ggccagccggtacgggctcccgatgcaccgaagttcggcatggtgcgggtacaggatcac
aacggtcgctttatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccgcgtcga
ctgattcggtcggaatga
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