Pseudomonas chlororaphis subsp. piscium: C4K32_1235
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Entry
C4K32_1235 CDS
T09060
Name
(GenBank) N-succinyl-L,L-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Pathway
pchp00300
Lysine biosynthesis
pchp01100
Metabolic pathways
pchp01120
Microbial metabolism in diverse environments
pchp01230
Biosynthesis of amino acids
Module
pchp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C4K32_1235
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pchp01002
]
C4K32_1235
Enzymes [BR:
pchp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
C4K32_1235
Peptidases and inhibitors [BR:
pchp01002
]
Metallo peptidases
Family M20
C4K32_1235
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
BNR_2
Motif
Other DBs
NCBI-ProteinID:
AZC67916
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Position
complement(1338758..1339909)
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AA seq
383 aa
AA seq
DB search
MTAHADLSPTLQLACDLIRRPSVTPVDADCQKLMMQRLGDAGFKLEPMRIEDVDNFWATH
GKHEGPVLCFAGHTDVVPTGPVQAWQNDPFDALIDEHGMLCGRGAADMKGSLAAMLVAAE
RFVADYPDHKGSVAFLITSDEEGPAHHGTKAVVERLAARKERLDWCIVGEPSSTSLVGDV
VKNGRRGSLGAKLTVRGVQGHVAYPHLAKNPIHLAAPALAELAAEHWDDGNAFFPPTSFQ
ISNLNSGTGATNVIPGELVAVFNFRFSTESTVEGLQQRVATILDKHGLDWHVEWALSGLP
FLTEPGALLDAVSASIKDVTGRETKASTSGGTSDGRFIATLGTQVVELGPVNATIHQVNE
RVLASDLDVLTEIYYQTLIKLLA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacggcccacgccgacctttcgccgaccctgcaactcgcctgtgacctgatccgccgc
ccgtcggtgacgccggtcgacgccgactgccagaagctgatgatgcagcgcctgggcgat
gccggcttcaagctggagccgatgcgcatcgaggatgtggataacttctgggccacccac
ggcaagcacgaaggcccggtgctgtgtttcgccggccataccgacgtggtgccgaccggc
ccggtccaggcctggcagaacgacccgttcgacgcgctgatcgacgagcacggcatgctc
tgcgggcgcggcgcggcggacatgaaaggcagcctggcggcgatgctggtagcggccgag
cgtttcgtcgccgactacccggaccacaaaggctcggtggccttcctgatcaccagcgac
gaagaaggcccggcccaccacggcaccaaggccgtggtcgaacgcctggcggcgcgcaag
gagcgcctggactggtgcatcgtcggcgagccgtcgagcaccagcctggtcggtgacgtg
gtcaagaacggccgtcgcggctccctcggcgccaagctcacggtgcgcggcgtacagggc
cacgtggcctacccgcacctggccaagaacccgatccacctggccgccccggccctggcc
gaactggccgcggaacattgggacgacggcaatgccttcttcccgccgaccagcttccag
atttccaacctgaattccggcaccggcgcgaccaacgtgatccccggcgagctggtggcg
gtgttcaacttccgcttctccaccgaatccacggttgaaggcctgcaacagcgcgtcgcc
accatcctcgacaagcacggcctggactggcatgtggagtgggcgttgtcgggcctgccg
ttcctcaccgagccgggcgccctgctcgacgcggtgtcggccagcatcaaggacgtcacc
ggccgcgagaccaaagcttccaccagcggcggcacctccgacgggcgcttcatcgccacc
ctcggcacccaggtggtcgagctgggcccggtcaacgccaccatccaccaggtcaacgag
cgggtgctggccagcgacctcgacgtgctgaccgaaatctactaccagaccctgatcaag
ttgctcgcctga
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