Pseudomonas chlororaphis subsp. piscium: C4K32_1341
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Entry
C4K32_1341 CDS
T09060
Name
(GenBank) Ribosomal protein S12p Asp88 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pchp03009
]
C4K32_1341
Enzymes [BR:
pchp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
C4K32_1341
Ribosome biogenesis [BR:
pchp03009
]
Prokaryotic type
ribosomal protein modification factors
C4K32_1341
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
YajR_YAM
Matrix_Paramyxo_N
Moricin
Motif
Other DBs
NCBI-ProteinID:
AZC68022
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Position
complement(1438776..1440113)
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AA seq
445 aa
AA seq
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MSTPTAPANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDS
AKAESLEVIGEAIKENGKVIVTGCMGVEEGNIRDVHPSVLAVTGPQQYEQVVSAVHEVVP
PKQDHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AQRLVKSGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSTLGVWVRLHY
VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKNWRQICPE
LIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLDLEVVPDEVK
QDRWERFMAHQQEISSARLQQRIGKEIEVLIDEVDEQGAVGRCFFDAPEIDGNVFIDGAG
DLKPGDKVWCRVTDADEYDLWAEVL
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccctaccgcgccagccaaccccaaggtcggcttcgtttccctgggttgcccg
aaagcgctggtcgattccgagcgcatcctcacgcaactgcgtatggaaggttatgacgtg
gtgtccacctaccaggacgccgacgtcgtggtggtcaacacctgcggtttcatcgactcg
gccaaggccgaatccctggaagtaatcggtgaagccatcaaggaaaacggcaaggtcatc
gtcaccggctgcatgggcgtggaagaaggcaatatccgcgacgtgcacccgagcgtgctg
gccgtgaccggtccgcagcagtacgagcaagtggtcagcgcggtgcacgaagtggtgccg
ccgaaacaggaccacaacccgctgatcgacctggtaccgccacaaggcatcaagctgacc
ccgcgtcactacgcgtacctgaagatttccgaaggctgcaaccacagctgcagtttctgc
atcatcccgtcgatgcgcggcaagctggtcagccgcccggtgggcgatgtactggacgag
gcccagcgcctggtcaagtccggggtcaaggaactgctggtgatctcccaggacaccagc
gcctacggcgtcgacgtcaagtaccgcaccggtttctggaacggcgcgccggtaaaaacc
cgcatgaccgagctgtgcgaagccctcagcaccctgggtgtctgggtccgtctgcactac
gtctacccgtacccgcacgtcgacgagctgatcccgctgatggccgccggcaagatcctg
ccgtacctggacatcccgttccagcacgccagcccgaaagtgctcaaggccatgaagcgc
ccggccttcgaagacaagaccctggcccggatcaagaactggcgccagatctgccctgag
ctgatcatccgctcgaccttcatcgtcggcttccccggcgaaaccgaagaagacttccag
tacctgctcgactggctgaccgaagcccagctcgaccgcgtcggctgcttccagtactcg
ccggtggaaggcgcaccagccaacgacctggacctggaagtggtcccggacgaggtcaag
caggaccgttgggagcgcttcatggcgcaccagcaggaaatcagctcggcgcgcctgcaa
cagcgcatcggcaaggaaatcgaagtgctgatcgatgaagtcgacgaacagggcgccgtg
ggccgctgcttcttcgacgccccggaaatcgacggcaacgtgttcatcgacggtgccggc
gacctcaaaccgggcgacaaggtctggtgccgggtcaccgacgccgacgaatacgacctg
tgggccgaagtcctgtaa
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