Pseudomonas chlororaphis subsp. piscium: C4K32_1507
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Entry
C4K32_1507 CDS
T09060
Name
(GenBank) Uracil-DNA glycosylase, family 1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Pathway
pchp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C4K32_1507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchp03400
]
C4K32_1507
Enzymes [BR:
pchp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
C4K32_1507
DNA repair and recombination proteins [BR:
pchp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C4K32_1507
Prokaryotic type
C4K32_1507
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AZC68185
LinkDB
All DBs
Position
1610621..1611313
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AA seq
230 aa
AA seq
DB search
MTDDDRIKLEPSWKQALRAEFDQPYMAELREFLRQEHAAGKEIYPPGPLIFNALNSTPLD
KVKVVILGQDPYHGPGQAHGLCFSVQPGVPAPPSLVNIYKELKRDLNIDMPNHGYLQSWA
DQGVLMLNTTMTVQRANAASHAGRGWQHFTDRIIEVVSQHQPHLVFLLWGSHAQSKQKLI
DATKHLVLTSVHPSPLSAYRGFIGCGHFSRTNKYLEQNGETPIEWRLPPV
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgacgaccgtatcaaactcgaacccagctggaagcaggcactgcgtgccgaa
ttcgaccagccttacatggcggagttacgcgagttcctgcgtcaggaacatgccgccggc
aaggagatctacccgccgggcccgttgattttcaatgcgctgaattccacgccgctggac
aaggtcaaggtggtgatcctcggccaggacccttaccacggcccgggccaggcccacggc
ctgtgcttctcggtgcagccgggcgtaccggcgccgccgtccctggtgaacatctataaa
gagctcaagcgcgacctgaacatcgacatgcccaaccacggctacctgcagagctgggcc
gaccaaggcgtgctgatgctcaacaccaccatgaccgtgcagcgggccaacgctgcttcc
cacgcgggcaggggctggcagcatttcaccgaccggatcatcgaagtggtgagccagcac
cagccgcacctggtgttcctgctgtggggctcccatgcccagagcaagcagaagctgatc
gatgccaccaagcacctggtgctgacctcggtgcacccgtcgcccctgtcggcgtaccgc
ggctttatcggttgcgggcatttcagccggaccaacaagtaccttgagcagaatggcgag
acgccgatcgaatggcggttgccgccggtttga
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