Pseudomonas chlororaphis subsp. piscium: C4K32_1640
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Entry
C4K32_1640 CDS
T09060
Name
(GenBank) Type I secretion system ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Pathway
pchp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4K32_1640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pchp02000
]
C4K32_1640
02044 Secretion system [BR:
pchp02044
]
C4K32_1640
Transporters [BR:
pchp02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
C4K32_1640
Secretion system [BR:
pchp02044
]
Type I secretion system
Adhesin protein transporter
C4K32_1640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
Peptidase_C39
AAA_33
AAA_29
TMEM135_C_rich
RTX
Motif
Other DBs
NCBI-ProteinID:
AZC68317
LinkDB
All DBs
Position
complement(1755118..1757277)
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AA seq
719 aa
AA seq
DB search
MTSMEPGSSGVDPRLSFDDPLLDGLLILCKLHDCTVSRASLSAGLPLAQQRLSLDLLPRA
AARASLQARLLRRELSAISKLNLPVLLILKHGRCAVLRRWGDDGQALILPSEAEGGEQWV
SQAELNDDYSGQALFARPRHELEELRNSLVPRVEAWFRDTLKLSRWLYSDAILASLLINL
LGLMVPLFVMQTYDRVVPNQATSTLWVLAIGLLIGTGFELVLRVVRAHLLDSAGKRTDVI
LSATLFERITGMAMKAKPATVGGFAQSIHDFQGLREFLTAVTLTSLIDLPFAVLMLLVIG
LLGGWLVVIPLLAFPLTILFAMLIQVRLRDTVQKSLSLGAERQALLIETLGGLETLKACS
AESERQHRWESTHGALTRLDSHARNLSALATNGTLFIQQFCGMATIVAGVYSIIAGNLSV
GALVATYMLGSRVLAPLGQIAGLITRYQQAQLTMRSTDALMALPQERDARQRPLERTQLQ
GALALNQVTFRYQGQNAAALSNISFSMQPGERIGIIGRSGSGKSTLGRLVMGFYAPEEGQ
LLLDGLDLRQLDVADLRQQIGYVAHDLPLLAGSLRDNLTLGAHYISDARMLEVAELTGVT
DLARQHPQGFDRPVGERGQLLSGGQRQAVLLARALLLDPPIMLLDEPTSAMDNSSEDALR
QRLHAWVQGKTLLLVTHRTSMLSLVERLVVLDNGRIVADGPKEAVIDALRKGRVGSATV
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
gtgaccagcatggaacccgggagctcaggcgtcgatccgcgcctgagctttgatgacccg
ttgttggacggattgctgatcctctgcaaactgcacgactgtaccgtcagtcgtgccagc
ctcagcgcggggctgcccctggcccagcaacgcctgagcctggacctgctgccccgcgcc
gcggcccgcgccagcctgcaggcgcgcctgctgcgtcgcgagctgtcggcgatctccaag
ctcaacctgccggtgctgctgatcctcaagcatggccgctgcgcggtcctgcgccgctgg
ggcgatgacggccaggcgctgatcctgcccagcgaagccgaaggcggcgagcagtgggtc
agccaggcggagctgaacgacgactacagtggccaggcgctgttcgcccggccacgccac
gaactggaagaactgcgcaactccctggtgccgcgggtcgaagcctggttccgcgacacc
ctgaaactctcgcgctggctgtacagcgacgcgatcctcgccagcctgctgatcaacctg
ctggggctgatggtgccgctcttcgtcatgcagacctacgaccgcgtggtgcccaaccag
gccacctcgaccctctgggtgctggccataggtttattgatcggcaccggtttcgagctg
gtgctgcgggtggtgcgcgcccatctgctggacagcgccggcaagcgcaccgacgtgatc
ctctccgccactctgttcgagcgcatcaccggcatggcgatgaaagccaagccggcgacc
gtcggtggcttcgcccagagcatccatgacttccagggcctgcgtgagtttctcaccgcc
gtgaccctgaccagcctgatcgacctgcccttcgccgtgctgatgctgctggtgatcggc
ctgctcggcggctggctggtggtgattccgttgctggcgtttcccctcaccatcctcttc
gccatgctgatccaggtgcgcctgcgcgacaccgtgcaaaagagcctgagcctgggcgcc
gaacgccaggcgctgctgatcgaaaccctcggcggcctggaaaccctcaaggcctgcagc
gccgaaagcgaacgccagcaccgatgggaaagcacccacggcgccctcacccgcctcgac
agccacgcgcgcaatctctcggccctggccaccaacggcaccctgttcatccagcagttc
tgcggcatggcgaccatagtcgccggggtctacagcatcatcgccggcaacctcagcgtc
ggcgcgctggtggccacctacatgctcggcagccgggtcctggcgccactggggcagatc
gccgggctgatcacccgctaccagcaggcgcagttgaccatgcgcagcaccgacgccctg
atggccctgccccaggaacgcgatgcccgccagcgcccgctggaacgcacgcaactgcaa
ggcgcgctggcgctcaatcaggtgaccttccgttatcaggggcagaatgccgcggccctg
agcaacatcagcttcagcatgcagcccggcgagcgcatcggcatcatcgggcgcagcggc
tccggcaagagcaccctggggcgcctggtcatggggttctatgcccccgaggaaggccag
ttgctgctggacggcctcgacctgcgccaactcgacgtggccgacctgcgccagcagatc
ggctatgtcgcccacgacctgccgttgctggccggcagcctgcgcgacaacctgaccctc
ggcgcccactacatcagcgatgcccgcatgctggaggtggccgagctgaccggagtcacc
gatctggcccgccagcatccccagggcttcgaccggccggtgggcgagcgtggccaactg
ctgtccggcggccagcgtcaggccgtgctgctggcccgggcactgctgctggacccgccg
atcatgctcctggacgaacccaccagcgccatggacaacagcagcgaagacgccctgcgc
cagcgcctgcacgcctgggtacaaggcaagaccctgctgctggtgacccaccgcacctcg
atgctcagcctggtggagcggctggtggtcctggacaacggacggatcgtcgccgacggc
ccgaaagaagcggtcatcgatgcactgcgcaagggccgtgtcggctctgcgacggtctag
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