Pseudomonas chlororaphis subsp. piscium: C4K32_1670
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Entry
C4K32_1670 CDS
T09060
Name
(GenBank) Ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pchp03009
]
C4K32_1670
Enzymes [BR:
pchp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
C4K32_1670
Ribosome biogenesis [BR:
pchp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
C4K32_1670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AZC68347
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All DBs
Position
1792268..1793485
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AA seq
405 aa
AA seq
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MSEHDQQDHQEIGPAGEKLQKVLARIGVGSRRDVESWISQGRIKVNGKEATLGLRVDLHD
AISIDGKVIKREEASESVRRVIMYNKPDGEICTRDDPEGRPTVFDKLPRPREGRWINIGR
LDINTTGLLMFTTDGELANRLMHPSYEMDREYAVRVRGEVDDEMIERLKAGVMLEDGPAK
FTDIQQAPGGEGFNHWYHCVVMEGRNREVRRLWESQGLVVSRLKRVRFGPVFLNSDLPMG
RWREMSQYEVDVLSAEVGLTPVAMPQLNAKSKDKLERMQRKSSRPVGKSERVRTLRPAHG
APAAGAPRPSREPQIEGERPGRKPAPRQDGERAPRAPRPVAGRGESGRGTPVADRPSDTK
RPAKPAPKSKRPGIVLVDKDAPSGKRRGAPAGSGQRPGFGRRKPE
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacatgaccagcaagaccaccaggaaatcggcccagcaggcgaaaagctgcag
aaagtcctcgcccgtatcggcgtcggctcgcgccgcgacgtggagtcctggatcagccag
ggccggatcaaggtcaatggcaaagaggccacccttggtctgcgcgttgacttgcatgac
gccatctccatcgatggcaaggtgatcaagcgcgaagaagcgtccgaatcggtccgccgc
gtgatcatgtacaacaaacccgacggcgagatctgcacccgtgacgatccggaaggccgt
ccgaccgtgttcgacaagctgccgcgcccacgggaaggccgctggatcaatatcggtcgc
ctcgacatcaacaccaccggcctgctgatgttcaccaccgacggtgagctggccaaccgc
ctgatgcacccgtcctacgagatggaccgggagtacgcggtacgtgtgcgtggcgaagtc
gacgacgagatgatcgagcgcctgaaagccggcgtgatgctcgaagacggcccggccaag
ttcaccgacatacagcaagcacccggtggcgaaggtttcaaccactggtaccactgcgtg
gtgatggaaggccgcaatcgtgaagtacgtcgcctgtgggagtcccagggcctggtggtc
agccgcctgaagcgcgtgcgtttcggtccggtgttcctcaactccgacctgccgatgggc
cgctggcgcgaaatgagccagtacgaagtggacgtcctcagcgccgaggttggcttgacg
ccggtggcgatgccgcagctcaacgccaagagcaaggacaagctggagcgcatgcagcgc
aaatcctcgcgcccggtgggcaagagcgagcgcgtgcgtaccctgcgtccggcccatggt
gcgcctgccgccggtgccccgcgcccgtcgcgcgagccgcagatcgaaggcgagcgtcca
ggccgcaaacctgcgccacgccaggatggcgagcgcgctccacgtgcgccgcgtccggtt
gccggccgtggtgaatcgggccgcggtacgccagtggcggatcgtccgagcgacaccaag
cgcccggccaagccagcgccgaagtccaagcgtccgggcatcgtcctggtcgacaaggat
gcgccgtcgggcaagcgccgtggcgccccggccggttccggccagcgcccgggtttcggt
cgccgcaagcctgagtga
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