Pseudomonas chlororaphis subsp. piscium: C4K32_1735
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Entry
C4K32_1735 CDS
T09060
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
KO
K02405
RNA polymerase sigma factor FliA
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Pathway
pchp02020
Two-component system
pchp02025
Biofilm formation - Pseudomonas aeruginosa
pchp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C4K32_1735
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
C4K32_1735
09142 Cell motility
02040 Flagellar assembly
C4K32_1735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchp03021
]
C4K32_1735
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pchp02035
]
C4K32_1735
Transcription machinery [BR:
pchp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C4K32_1735
Bacterial motility proteins [BR:
pchp02035
]
Flagellar system
Flagellar assembly proteins
Stator
C4K32_1735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_30
UPF0122
MarR_2
GerE
Glyco_tranf_2_4
Rv2175c_wHTH
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
AZC68412
LinkDB
All DBs
Position
1862135..1862875
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AA seq
246 aa
AA seq
DB search
MSASGYNLYKKSARDSQYELIERYAPLVKRIAYHLLARLPASVQVEDLIQAGMIGLLEVS
TKYDASKGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTRMVSDAIRAIEAKTGRDAK
DHEVAAELQLSLDDYYGILNDTLGSRLFSFDDLLQDGEHEGLHEDGASAHLEPSRDLEDE
RFQAALADAIANLPERERLVLALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRGRL
GEWRAR
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccagcggctacaacctttacaaaaagtcggcacgtgacagccagtacgaattg
atcgagcgttatgcgccactggtcaagcgtattgcctatcacctgctggcgcgcctgccg
gccagtgtccaggtcgaagacctgatccaggccgggatgatcggtctgctcgaagtgtcg
accaagtacgacgcgagcaagggcgcgagtttcgagacgtacgcgggtatccgtatccgt
ggtgcgatgctcgatgaggttcgtaaaggtgactgggcgccgcgttcggtacatcgcaat
acccggatggtgagcgatgccattcgcgcaattgaagctaaaaccggtcgtgacgctaaa
gatcatgaagttgcggccgaacttcaattgagtctcgacgattattacgggattttgaac
gacaccttgggcagtcgcctgttcagcttcgacgacctgttgcaggacggcgagcatgaa
gggctgcatgaggatggcgcgagtgctcatctcgagccgtcgcgcgacctggaggacgaa
cgtttccaggctgcgctggcggacgcgattgccaatttgccggagcgtgagcgactggtc
ttggcgctgtactacgacgaagagctgaacctcaaggaaatcggtgaggtcctgggggtc
agcgaatcgcgggtcagccagttacacagccagtgcgcggcccgtttgcgggggcgtttg
ggagagtggcgagcgcgctga
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integrated database retrieval system
