Pseudomonas chlororaphis subsp. piscium: C4K32_1772
Help
Entry
C4K32_1772 CDS
T09060
Name
(GenBank) Transcriptional regulator, AcrR family
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pchp03000
]
C4K32_1772
Transcription factors [BR:
pchp03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
C4K32_1772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
GTP_CH_N
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AZC68449
LinkDB
All DBs
Position
complement(1896993..1897601)
Genome browser
AA seq
202 aa
AA seq
DB search
MSTIRERNKELILRAASEEFADKGFAATKTSDIAAKAGLPKPNVYYYFKSKENLYREVLE
SIIEPILQASTPFNADGVPSEVLSGYIRSKIRISRDLPFASKVFASEIMHGAPHLSPDQV
EQLNAQAKHNIDCIQTWIDRGQIAPIDPHHLMFSIWAATQTYADFDWQISVVTGKAKLDE
SDYEAAAQTIIRLVLKGCETDK
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatccgcgagcgcaacaaagaactgatcctgcgggcagccagtgaagagttt
gccgacaaaggcttcgctgcgaccaaaaccagcgacatcgcggccaaggcggggttgccc
aaacccaacgtctactactacttcaaatccaaggaaaacctctaccgcgaggtcctggaa
agcatcatcgagccgatcctccaggcttcgaccccgttcaacgccgacggcgtgcccagt
gaagtgctgagcggctacatccgctcgaagatccgcatctcccgcgacctgcccttcgcc
tccaaggtgttcgccagcgagatcatgcacggtgccccgcacctgagcccggaccaggtc
gagcagctcaatgcccaagccaagcacaacatcgattgcatccagacctggatcgatcgt
ggtcagatcgcgcccatcgacccgcaccacctgatgttcagcatctgggccgcgacccag
acctatgccgatttcgactggcagatttcggtggtgaccggcaaggccaagctggacgag
tccgattacgaagccgccgcccagaccatcatccgcctggtgctcaagggctgcgaaacg
gacaagtaa
DBGET
integrated database retrieval system
