Pseudomonas chlororaphis subsp. piscium: C4K32_2047
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Entry
C4K32_2047 CDS
T09060
Name
(GenBank) DNA/RNA helicase, SNF2 family
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ResIII
SWIM
PI3K_p85B
DUF5624
Motif
Other DBs
NCBI-ProteinID:
AZC68719
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Position
complement(2191479..2194172)
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AA seq
897 aa
AA seq
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MSPTLTKPLAPSWVSRFKEQALERGRRYALENRVRIVQAGDSVITASCEGSGGNVYRQTI
SLRESAKNTLLMVEASCTCPVRSNCKHIAAVLLKIEETLAYPAAAKDAELLEKLQAVLEN
RSPAPLPQQIVDNVQPIPRLWLASIEFSAFEPRNGKMQRYIQHRAALSFSYLEEYVSGQK
NADVLIRQEHQTLRIKRQPEVEQRYREQLRALGFKIATRQSKALPESAGELYEMVNDSAW
LTFTLNELPKLRSQGWELQIDDDFGFDLTAVDDWYATVDEAPGRDWFDLELGIIVNGERL
SLLPILLNLMRSHTEILNPERLARRRDDELILVNIPGRPNSPNGPLQVALPYGRLKPVLA
TLGEFYLQEPGETTLRLSSADATRLNPLEDLPLLWEGGEHIRSFAQRLRDIKDYSAPAPE
GLNATLRPYQLEGLSWMQSLRQLEVGGILADDMGLGKTLQTLAHVLSEKNARRLDRPCMV
VMPTSLIPNWLDEAAHFTPQLKVLALYGAGRKKHFARLADYDLILTTYALLPKDVEQLAA
LPLHVLVLDEAQYIKNPSSKAAHAARELNARQRLCLSGTPLENHLGELWSLFHFLLPGWL
GDVKSFNRDYRVPIEKHASEVRLQHLNGRIKPFLLRRTKEQVATELPPKTEIIHWVELNE
AQRDVYETMRLAMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNEDSVPTRGS
SSGKLDSLMEMLEELFDEGRRILLFSQFTSMLSLIEAELKRRNVAYALLTGQTRDRRTPV
RDFQSGKLQIFLISLKAGGVGLNLTEADTVIHYDPWWNPATENQATDRAYRIGQEKPVFV
YKLIARGTVEEKIQHLQQEKSDLAAGVLDGRKAGDWKLQSEDIEALFAPLPDKKGGH
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgtccccgaccctgaccaaacccctggcaccttcctgggtcagccgattcaaggaacag
gccctggagcgtggccgccgctacgctctggagaaccgcgtcaggatcgtccaggccggc
gacagcgtcatcaccgccagttgcgaaggttcggggggcaatgtctatcggcagaccatc
agcctgcgcgagtcggccaagaacaccttgctgatggtcgaagcctcctgcacctgcccg
gtgcgcagcaattgcaaacacatcgccgcggtgctgctgaaaatcgaggaaaccctggcc
tacccggcagcggcgaaagacgccgagctgctggaaaaactccaggccgtgctggaaaac
cgcagccccgccccgctgccgcaacagatcgtggacaacgtgcagccgataccccggctg
tggctggccagcatcgagttcagcgccttcgaaccgcgcaacggcaagatgcagcgctat
atccagcaccgtgccgcgctgtcgttcagctacctggaggaatacgtcagcgggcagaaa
aacgccgacgtactgattcgccaggaacaccagaccctgcgcatcaaacgccagccggaa
gtcgaacaacgctatcgcgaacagctgcgggcgctgggtttcaagatcgccacccggcag
agcaaggccctgccggaaagcgccggcgagctatatgaaatggtcaacgacagcgcctgg
ctgaccttcaccctcaacgaattgcccaagctgcgcagccagggttgggagctgcagatc
gacgacgacttcggcttcgacctgaccgccgtggacgactggtacgccacggtggacgaa
gccccggggcgcgactggttcgacctggaactgggcatcatcgtcaatggcgaacgcctg
agcctgctgccgatcctgctcaacctgatgcgctcccacaccgagatcctcaatccggaa
cgcctggccagacgccgggacgacgagttgatcctggtaaatattcccgggcgccccaac
tcgcccaacggccccctgcaggtggcgctgccctacggccgactgaaaccggtgctggcc
accctcggtgagttctatctgcaggagcccggcgaaaccacgctgcgcctgagcagcgcc
gacgcgacccgcctcaatccgctggaagacctgcccctgctctgggaaggcggcgaacac
atccgctccttcgcccagcggctgcgggatatcaaggactactcggcccccgcgccggaa
ggcctgaacgccaccctgcgcccctatcagctcgaaggcctgagctggatgcagtccctg
cgccagctggaagtcggcggcatcctggccgacgacatgggcctgggcaaaaccctgcag
accctggcccacgtgctcagcgaaaagaacgccaggcgcctggatcggccgtgcatggtg
gtgatgcccaccagcctgatccccaactggctcgacgaggcggcgcacttcacgccgcag
ctcaaggtcctggccctgtatggcgccggccgcaagaagcacttcgcccggctggccgac
tacgacctgatcctgaccacctacgcgttgctgcccaaggatgtcgagcagctcgccgcc
ctgcccctgcatgtcctggtgctggatgaggcgcaatacatcaagaacccgtcgagcaag
gcggcccatgccgcgcgcgagctcaatgcccggcagcgcctgtgcctgagtggcacgccg
ctggagaatcacctgggcgagctgtggtcgctgttccacttcctgctgcccggctggctg
ggtgacgtgaaaagcttcaatcgcgactaccgcgtaccgatcgaaaagcacgccagcgaa
gtgcgcctgcaacacctcaacgggcggatcaaacccttcctgttacgccgcaccaaggaa
caggtggccaccgagctgccgcccaagaccgagatcatccactgggtggagctcaatgaa
gcccagcgcgatgtgtacgaaaccatgcgcctggccatggacaagaaagtccgcgacgaa
atcacccgcaaaggcgtagcccgcagccagatcatcattcttgaagcgctgctgaagctg
cgccaggtgtgctgcgacctgcgcctggtcaacgaagactcagtgccgacgcgaggcagc
tcctccggcaagctcgacagcctgatggaaatgctcgaggagctgttcgacgagggccgg
cgcatcctgctgttctcgcaattcacctcgatgctgagtctgatcgaagccgagctgaaa
cgccgcaacgtcgcctatgccctgctgaccgggcagacccgcgaccgccgtacgccagtc
agggacttccagagcggcaagctgcagatcttcctgatcagcctgaaagccggcggcgtc
ggcctcaacctgaccgaggccgacaccgtgatccactacgacccctggtggaacccagcc
acggaaaaccaggccaccgaccgcgcctatcggatcggccaggagaagccagtgttcgtc
tacaagctgattgcccgtggcacggtggaagaaaaaatccagcacctgcagcaggagaaa
tccgatttggcagcaggtgtgctggatgggcgcaaggccggggactggaagctgcagagc
gaagacatcgaagccctcttcgccccgctgcccgacaagaaaggcggacactga
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