Pseudomonas chlororaphis subsp. piscium: C4K32_2161
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Entry
C4K32_2161 CDS
T09060
Name
(GenBank) Type III secretion thermoregulatory protein (LcrF,VirF)
KO
K20968
AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Pathway
pchp02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
C4K32_2161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pchp03000
]
C4K32_2161
Transcription factors [BR:
pchp03000
]
Prokaryotic type
Helix-turn-helix
AraC family
C4K32_2161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ExsA_N
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AZC68823
LinkDB
All DBs
Position
2302931..2303662
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AA seq
243 aa
AA seq
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MRGELTIRDVNVTKHVEAGELLVVRRGSYLVRTGEQRSDLLWIPLSDQFLQSFIQRFGAL
LGEVERREKSGVNIIAFESNPLLADCVKSLKNLLVHEHPPMLASLKVEELLILFVFGPQG
AELMSLLRQQSNRNVERLQLFMEQYFLKEWRISQFSREFGMGLTTFKDLFGVVYGVSPRA
WISERRILHAHHLLLNSELSIVDIAMASGFSSQSYFTQSYRRRFGCTPSRSRQCKESALS
AEA
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgaggggggagctgacaattcgagatgttaacgtaacaaagcacgttgaagctggcgag
ctattggttgtcaggcggggtagctatctggtgagaactggggagcagcgaagtgacttg
ttatggattccgttgtcggatcagttcctgcaaagctttatccagcgcttcggcgcattg
ctgggtgaggttgagcggagggaaaaatcaggtgtaaatattatcgcttttgagagcaat
ccattgctcgctgactgtgtaaaaagtttgaagaatttgcttgtgcacgaacaccctccc
atgctggcatcgttgaaggtggaagagttgctgattctgtttgtctttggtcctcaaggc
gcggaattgatgtcattactgcgccagcagagcaacaggaacgtcgagcgattgcagctt
tttatggagcagtacttcctgaaggaatggcggataagtcagttttccagggagtttggc
atgggcttgacgacgttcaaggacctttttggagttgtgtacggtgtctctcccagggcc
tggatcagtgagagacgaattttgcatgcccatcatttgctccttaatagcgagctgagc
attgtggatattgcgatggcaagtggtttttccagtcagtcgtactttacccagagctac
cggcgtcgattcggttgtaccccaagtcgctcccggcagtgcaaggagtccgcgttgagt
gcggaggcgtaa
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