Pseudomonas chlororaphis subsp. piscium: C4K32_2244
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Entry
C4K32_2244 CDS
T09060
Name
(GenBank) Glycolate utilization operon transcriptional activator GlcC
KO
K11474
GntR family transcriptional regulator, glc operon transcriptional activator
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pchp03000
]
C4K32_2244
Transcription factors [BR:
pchp03000
]
Prokaryotic type
Helix-turn-helix
GntR family
C4K32_2244
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_11
HTH_36
FadR_C
LexA_DNA_bind
Rrf2
TrmB
HTH_50
RepL
Motif
Other DBs
NCBI-ProteinID:
AZC68906
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Position
2421556..2422320
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AA seq
254 aa
AA seq
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MDRSDSGRHQVADVVCERIERLIVDGVLKTGQLLPSERRLTEKLGVSRTALREGLKLLRA
RGIIETEQGKGSFVAQLSGQGATSALMHLFSSQPRTLYDLFEVRSLLEGESARLAALRGT
DADFVLIGRAYQALLDAHDQELEASAHARLDHAFHLAICEASHNPVLVQTLRSLTDLLLN
SVFASVNNLYHRQAQKRQIDRQHARLYNAVTGRLPEQARKAAIAHIQGICDNLREIENEE
QRLVRATLRLEGWN
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggacagaagcgattcggggcggcatcaggtggcggatgtggtctgtgagcgcatcgag
cgcctgatcgtcgacggcgtattgaagaccggccagctgctgccctcggagcggcggctc
acggaaaagctcggggtgtcgcgcacggcattgcgcgaaggcctgaagctgttgcgggcg
cggggcatcatcgaaaccgaacagggcaagggctcctttgtcgcccagttgtcggggcag
ggcgcgacctcggccttgatgcatctgttcagctcccagccgcgcaccctgtacgacctg
ttcgaagtgcgcagcctgctggaaggcgagtcggcgcggctggcggcgttgcgcggcacc
gatgccgatttcgtgctgatcggccgcgcctatcaggcgctgctggacgcccacgaccag
gagctggaggcctcggcccatgcgcggctggatcacgctttccacctggcgatctgcgag
gcctcgcacaacccggtgctggtgcagaccctgcgctcgctgaccgacctgctgctcaac
tcggtgttcgcctcggtcaacaacctctatcaccgccaggcgcagaagcggcagatcgac
cgccagcacgcgcggctctacaacgccgtcaccgggcgcctgccggagcaggcgcgcaag
gccgccatcgcccatatccagggtatctgcgacaacctgcgggaaatcgaaaacgaggag
cagcgcctggtgcgggcgaccttgcgcctggaaggctggaactga
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