Pseudomonas chlororaphis subsp. piscium: C4K32_2470
Help
Entry
C4K32_2470 CDS
T09060
Name
(GenBank) Transcriptional regulator of pyrimidine catabolism (TetR family)
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pchp03000
]
C4K32_2470
Transcription factors [BR:
pchp03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
C4K32_2470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
Motif
Other DBs
NCBI-ProteinID:
AZC69132
LinkDB
All DBs
Position
2647994..2648614
Genome browser
AA seq
206 aa
AA seq
DB search
MGNHKIEIRRSNVEKILLAAEKVFAEKGFSGTAMADIAAEVQLPRSNLHYYFSTKSELYS
AVLLELLELWKQDALCFEMFDDPRVVLSSYIRAKMNHSRSRPYGSKVWANEIIHGAPTLG
EALDASLYDWAKMKEAKIRQWVEDQRILPVEPSSLLYMIWASTQHYADFDHQIMIINEHQ
PLSDRQFEKAVQTVTSVILRGIGLEP
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatcacaagatcgagatccgtcgcagcaacgtcgagaagatcctcctggcggcg
gaaaaggtgttcgccgaaaaaggcttcagcggcaccgccatggccgatatcgccgccgag
gtgcaattgccgcgctccaacctgcattactacttcagcaccaagagcgagctgtacagc
gcggtgctgctggaactgctggaactgtggaagcaggacgccctgtgcttcgagatgttc
gacgacccgcgggtggtgctcagcagctacatccgcgccaagatgaaccattcccgcagc
cggccctatggctcgaaagtctgggccaacgaaatcatccacggcgcgccgaccctgggc
gaggccctggacgccagcctgtacgactgggcgaagatgaaggaagcgaagatccgccag
tgggtcgaagaccagcgcatcctgccggtggagccgtcgagcctgctgtacatgatctgg
gcctcgacccagcactacgccgacttcgaccaccagatcatgatcatcaacgaacaccag
ccgctgtcggacaggcagttcgaaaaagcggtgcagacggtgaccagtgtgattctgcgg
gggattgggttggagccgtag
DBGET
integrated database retrieval system
