Pseudomonas chlororaphis subsp. piscium: C4K32_2832
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Entry
C4K32_2832 CDS
T09060
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchp03400
]
C4K32_2832
DNA repair and recombination proteins [BR:
pchp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C4K32_2832
Archaeal homologous recombinant proteins
C4K32_2832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
nSTAND3
ABC_tran
MMR_HSR1
cobW
AAA_22
AAA_25
RsgA_GTPase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AZC69494
LinkDB
All DBs
Position
complement(3028297..3031938)
Genome browser
AA seq
1213 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFSAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNNIGRETKVPEVDSEMLTSDPRTLLRRGTGSGYAEVDFVGIDGHRYRARWETNRARDKA
NGKLQASKQSLHDLDSNQLLASQKRDYEQLIEAKLGLNFEQFTRAVMLAQSEFSAFLKAD
DKERSELLEKLTNTSIYSQLGRRAYSKSKEAEEQHKTLKAQASGITPLEPEARAELDQRF
DTAQQQLKAQQAQLKQLELQHGWLKELQQLQDQQQSAAEQLQQAQTAWEGLASERTRLTR
LEQLAPQRHQFARQVELNQQLTPLREQIRQQRQQQDTEQQRQGELEHQLGTAQAALLAAQ
EQQGTSAPLLREAFAEQSTLAHLGKSCGEAGELQDKLQQASEQGQQAIQAMLEQQRLVGE
RLQRIAEQLEHSTHLAPLSDAWNAYRDRLQQLMLAGNRLNKGQEELPGLQQRAASAAQQL
AAQRDELQVLYSEAGAEPHAVAEQLQILSDLLQDNRKQQRAFEELARLWASQQELDKRGA
ELADKLQTAARQREELNRIGLQSKAELTVAEQTLTVTQQLLERQRLARSASVEELREQLQ
DDQPCPVCGSHEHPYHQPEALLQSLGRHDESEEANARKAVDELKEKLAELRSQVGGLIAQ
QKEFLQQQEQLASQQQALAPSIEAHPLSAALLDQDAGKRDAWLNQQLSQLNQSIQQDEQR
QGALLKLQKDAGRLQQQLQAAVEASQEATQQLTQQQQQLGADRQRLEEELSAFATLLPAD
TLEALRSDPAATFIQIDQQVMQRLAQLDQQKEEQQEQQQRQLALDKEQDRQQTRVQQLQA
AQEQFNTLAEQQQGARNKLAQLLGEHASAEQWQQHLEQAVEQARAADVLANQQLQEVRSL
LVQLGAELQGKEERLLALETEQQELGSRIADWRQQHPELDDGGLEQLLSLDDQQVAALRQ
QLQASEKAVEQARVLVTEREQRLHSHQAQHDGQLDAEQLANALSELHNQLAASEQLSAEL
RAQQSEDQRRQDANQALSEQIAQAYAEWQRWARLNALIGSASGDTFRKIAQAYNLDLLVH
HANAQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
RRQGNGLSTLEVK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaagattcttgccatccgcctgaagaacctggcctccctggccggcccctttgaaatc
gacttcagcgccgagccgctggccagcgccgggctgttcgccatcaccgggcccaccggc
gccggcaagagcaccctgctcgatgccctgtgcctggcgctgttcggcgcggtgccgcgg
ctgaacaatatcggccgcgaaaccaaggtgccggaggtggacagcgagatgctcaccagc
gacccgcgcaccctgctgcggcgtggcaccggcagcggttacgccgaggtcgactttgtc
ggcatcgacggccatcgctaccgtgcgcgctgggaaaccaaccgcgcccgggacaaggcc
aacggcaagctgcaggccagtaaacagagcctgcacgacctggacagcaatcaactgctg
gccagccagaagcgcgactacgagcagttgatcgaagccaagctggggctcaacttcgaa
cagttcacccgcgcggtgatgctggcccagagcgagttcagcgccttcctcaaggccgac
gacaaggaacgcagcgagctgctggaaaagctcaccaacacctcgatctacagccagctc
gggcggcgcgcctacagcaagagcaaggaagccgaggaacagcacaagactctcaaggcc
caggccagtggcatcaccccgctggagcccgaggcccgcgccgagctggaccagcgtttc
gataccgcccagcagcagctcaaggcccagcaggcacagctcaaacagctggagctgcaa
cacggctggctcaaggaactgcagcagttgcaggaccagcagcaaagcgccgccgaacag
ctgcaacaggcgcaaacggcctgggaaggcctggccagcgagcggaccaggctgacccgc
ctggagcagttggcgccgcaacgccatcagttcgcccggcaggtggaactgaaccagcaa
ctgacgccgctgcgcgagcagatccggcaacagcgccagcaacaagacacggagcaacaa
cgccagggcgaactggagcatcagttgggcacggcccaggccgcgttgctcgccgcccag
gaacagcaaggcaccagcgccccgctgctgcgcgaggcctttgccgagcaaagcaccctc
gcccacctgggcaagagctgcggcgaagccggcgaactccaggacaaactgcaacaggcc
agcgagcaaggccagcaggcgatccaggccatgctcgaacagcagcgcctggtgggcgaa
cgcctgcagcggattgccgagcagctggaacacagcacccatctggcgccgctgagcgac
gcctggaatgcctaccgcgatcgcctgcaacagctgatgctggccggcaaccggctgaac
aagggccaggaagaactgcccggcctgcaacaacgggccgccagcgcggcgcagcaactg
gccgcgcaacgcgatgaactgcaggtgctgtacagcgaagccggtgccgagccccatgcg
gtggccgaacagttgcagatcctcagcgacctgctgcaggacaaccgcaagcaacagcgc
gccttcgaagaactggcgcggctgtgggccagccagcaggagctggacaagcgcggcgcg
gaactggcggacaagctgcagaccgccgcacgccagcgcgaagagctgaaccggatcggc
ttgcagagcaaggccgaactgacggtcgccgaacagaccctgacggtgacccagcaactg
ctggaacgccagcgcctagcgcgcagcgccagtgtcgaagagctacgcgagcagttgcag
gacgatcagccctgtccggtctgtggcagccacgagcatccctaccatcaacccgaggcg
ctgttgcagagcctgggtcgccacgacgaaagcgaagaagccaacgcgcgcaaggcggtg
gatgaactcaaggaaaaactcgccgaactgcgcagccaggtcggcggcctgatcgcccag
cagaaagaattcctccagcaacaggaacaactggcaagccagcagcaggccctggcgccg
agtatcgaagcccatccgttgtcggcggcgctgctcgaccaggacgccggcaagcgcgat
gcctggctgaaccagcaactgagccagttgaaccaaagcatccagcaggacgaacagcgc
caaggcgccctgctgaaactgcaaaaggacgccgggcgcctgcaacagcaactgcaagcg
gcggtcgaggccagccaggaagccacgcaacagctgacccagcagcaacagcagctgggc
gcggatcgccaacgcctggaggaagagctgtcggccttcgccaccctgctgccggccgat
accctcgaagccctgcgcagcgacccggccgcgacctttatacagatcgaccagcaggtc
atgcagcgcctggcacagctcgaccaacagaaggaagaacaacaggagcagcaacagcgc
cagctggccctggacaaggaacaggaccgccagcagacccgcgtgcagcaactgcaagca
gcccaggagcaattcaacaccctggccgaacaacagcaaggcgcccgcaacaagctcgcg
caactgctgggcgaacacgccagtgccgagcagtggcagcagcatctggaacaggccgtg
gaacaggcgcgcgccgccgatgtgctggccaaccagcagttgcaggaagtccgcagcctg
ctggtgcagctgggcgcggaactgcagggcaaggaagaacgcctgctggccctggaaacc
gaacagcaggaactgggcagcaggatcgccgactggcgccagcagcacccggaactggac
gacggcggcctggaacagctgctcagcctcgacgaccagcaggtcgccgcgctgcgtcag
caactgcaagccagtgaaaaggcggtggaacaggccagggtcctggtcaccgaacgcgag
caacgcctgcacagccatcaggcccagcacgacggccaactcgacgccgaacaactggcc
aacgccctgagcgaactgcacaaccaactggccgccagcgaacagctgagcgccgaactg
cgcgcccagcagagcgaggaccagcgccggcaggacgccaaccaggcgctgagcgagcag
atcgcccaggcctacgccgaatggcaacgctgggcgcggctcaatgccttgatcggttcg
gccagcggcgacaccttccgcaagatcgcccaggcctacaacctcgacctgctggtgcat
cacgccaatgcacagctgcgccagctggtgcggcgttatcgcctcaagcgcggcggcagc
atgctcggcctgctggtgatggacacggaaatgggcgatgagctgcgctcggtgcattcg
ctgtccggcggcgagaccttcctggtgtccctggcgctggccctgggcctggcgtccatg
gcctccagcacgctgaagatcgagtcgctgtttatcgacgaaggtttcggcagcctcgat
ccggaatccctgcaactggcgatggacgccctcgacggcttgcaggcccagggacgcaag
gtggcggtgatttcccacgtgcaggaaatgcacgagcggattccggtgcagatccaggta
cggcgccagggcaacggcctgagtaccctggaggtgaaatga
DBGET
integrated database retrieval system
