Pseudomonas chlororaphis subsp. piscium: C4K32_2943
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Entry
C4K32_2943 CDS
T09060
Name
(GenBank) LysR family transcriptional regulator
KO
K18900
LysR family transcriptional regulator, regulator for bpeEF and oprC
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pchp03000
]
C4K32_2943
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
pchp01504
]
C4K32_2943
Transcription factors [BR:
pchp03000
]
Prokaryotic type
Helix-turn-helix
LysR family
C4K32_2943
Antimicrobial resistance genes [BR:
pchp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
C4K32_2943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
ALKL1_2
Motif
Other DBs
NCBI-ProteinID:
AZC69605
LinkDB
All DBs
Position
3169416..3170333
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AA seq
305 aa
AA seq
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MDRFNAMRVFTRIVDLGGFAKAADSLQMPRASVTVLIKQLEAHLGVQLLLRTTRQVTPTL
DGAAYYQRCVRLLADLEETEAVFSVARHNPRGTLRIDMPAGIGRLVVIPALPAFSERYPL
IDLEIGLNDRPVDLIREGVDCVLRGGLCLDDSLVARPLLALEQVTCASPAYLRRRGVPQS
LDDLAGHQMIEYFSSVSGKRYGLEFEVQGQVLLPELPKQVSVNSADGYLAACEAGYGLVQ
TPYYHVAQQLAEGRLSEVLRHIPPPRMPLSALYPPHRHLSTRVRVFVDWLVELFAQPGIH
NTRLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggaccgttttaacgccatgcgtgtgttcacccgcatcgtcgacctcggcggtttcgcc
aaggccgccgacagcctgcagatgccccgggcctcggtgacggtgctgatcaagcagttg
gaggcgcatctgggcgtgcagctgctgttgcgcaccacccgccaggtcacgccgaccctg
gacggcgccgcctattaccagcgttgcgtgcggctgctggccgacctggaggaaactgag
gcggtgttctccgttgcgcgccacaacccgcggggcaccttgcgcatcgacatgccggcg
gggatcgggcggttggtggtgatcccggcgctgccggcgttctccgagcgttacccgttg
atcgatctggaaatcggcctcaacgatcgaccggtggacctgattcgcgaaggggtggac
tgcgtgttgcgcggcggcctgtgcctcgacgactcgctggtggcccgaccgttgctggcg
ctggagcaggtgacttgcgccagccccgcctacctgcgccggcgcggtgtgccgcagagc
ctggacgacctggccgggcatcagatgatcgagtatttctccagcgtcagcggcaagcgt
tatggcctggagttcgaggtgcagggccaggtgctgttgccggagctgcccaagcaggtg
tcggtcaacagcgccgatggttacctggccgcctgcgaggcgggctacggcttggtgcag
acgccttattaccatgtcgcccagcagttggccgaagggcgcctgagcgaagtgctccgg
cacatcccgccgcccaggatgccgttgagcgcgctgtacccgccgcaccggcatctgtcg
acacgggtcagagtgtttgtcgattggctggtggagttgttcgcccagccggggattcac
aacacccggctggcgtag
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