Pseudomonas chlororaphis subsp. piscium: C4K32_3131
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Entry
C4K32_3131 CDS
T09060
Name
(GenBank) Transcriptional regulator NfxB
KO
K18294
TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Module
pchp_M00639
Multidrug resistance, efflux pump MexCD-OprJ
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pchp03000
]
C4K32_3131
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
pchp01504
]
C4K32_3131
Transcription factors [BR:
pchp03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
C4K32_3131
Antimicrobial resistance genes [BR:
pchp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexCD-OprJ [MD:
M00639
]
C4K32_3131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_IclR
TetR_N
HTH_6
HTH_24
HTH_AsnC-type
HTH_31
LacI
HTH_10
SpoIIID
MarR_2
HTH_Tnp_1_2
TetR_C_4
TetR_C_29
HTH_11
DUF6066
MarR
HTH_26
Motif
Other DBs
NCBI-ProteinID:
AZC69793
LinkDB
All DBs
Position
complement(3372955..3373527)
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AA seq
190 aa
AA seq
DB search
MSLTPQDERLIKALALAIVDHPRATLKELAESAGVSKATLHRFCGTRDNLVQILESHGDT
VLNRIIAATNLQQDEPQEALRGLINEHLAPAHREMLVFLLFQYRPDTFGINGEATGLQPY
IDALDAFFLRGQQAGAFRIDITAAVFSELFLTMVFGMIDAERRGRAASANSANVLEQMFL
HGAAAAVSPK
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgactccccaagacgaacgactcatcaaggcgctggccctggccattgtcgac
caccctcgggcgacgctcaaggaactggctgaatccgccggggtgagcaaggccaccctg
caccgcttctgcggcactcgcgacaatctggtgcagatcctggaaagccacggcgatacg
gtgctcaaccggatcatcgctgccaccaatctgcagcaggatgaaccgcaggaagcactg
cgtggcctgataaacgaacacctggccccggcgcaccgcgaaatgctggtattcctgctg
ttccagtatcgccccgacaccttcggcatcaatggtgaagctacaggcttgcaaccctat
atcgatgccctggatgcgttcttcctgcgtggccagcaggcgggcgcctttcgtatcgac
atcaccgctgcggtcttcagcgaactgttcctgaccatggtcttcggcatgatcgatgcc
gaacgccgcggccgcgcggccagcgccaattcagccaacgtgctggaacagatgttcctg
catggcgcagccgcggctgtgagtcccaagtag
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