Pseudomonas chlororaphis subsp. piscium: C4K32_3653
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Entry
C4K32_3653 CDS
T09060
Name
(GenBank) Uncharacterized protein ImpJ/VasE
KO
K11893
type VI secretion system protein ImpJ
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Pathway
pchp02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
C4K32_3653
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pchp02044
]
C4K32_3653
Secretion system [BR:
pchp02044
]
Type VI secretion system
Imp/Vas secretion system core components
C4K32_3653
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
AZC70313
LinkDB
All DBs
Position
complement(4019330..4020664)
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AA seq
444 aa
AA seq
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MSWNNRVVWSEGMFLRPQHLQQHDRYMEALIDGRCRPLSAGGWGFSELRIDESLLSQGKV
AIVSARGVLPDGTPFDIPGDDLPPPPLNVNDNLRDAQVFLGLPLKRAGSRDTVGEGEAPG
GARYISQVREVRDDNAAFESRASLAIGGKALRLLTERDGLGEYACLGVIRVLEKRADNAV
QVDEDYIPPLLDVAASSVLAAFRQELQGLLHQRGEALAGRVVASGAGGASEIADFLLLQL
VNRAEPLLSHLARLSPLHPQDFYREAVCLAGEFATFSAAGRRPSDYPAYAHDDLASSFAP
VMHDLRQALSMVIDTRATPIPIVEKSYGVHVAMLADKSLLEMASFILVVRADVPAETLRT
HFPQQAKIGSVEHIRDLVNLQLPGIALLSMPVAPRQIPYHAGSSYFELDRGSEHWKQLTH
SGGFAFHIAGQFPGLNLAFWAIRG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggaataaccgtgtggtgtggtccgaaggaatgtttctgcggccgcagcatctc
cagcagcatgatcgctacatggaagccctgatcgatggccgttgccgcccgttgagcgcc
gggggctgggggttctccgagctgcgcatcgacgagtccctgctcagccagggcaaggtg
gcgattgtcagcgcgcgtggggtgctgcccgatggcacgcctttcgacattcccggcgac
gatctgccgccgccgccactgaacgtgaacgacaacctgcgcgatgcgcaggtctttctg
ggcttgccgctcaagcgtgccggcagccgcgacaccgtgggggagggcgaggcaccgggc
ggtgcgcgctatatcagccaggtgcgggaagtgcgcgatgacaacgccgccttcgagagc
cgggcgtcactggcgatcggcggcaaagccctgcgcctgctgaccgagcgcgacggcctc
ggcgaatatgcctgcctcggtgtgatccgggtcctggaaaaacgcgcggacaacgccgtg
caagtcgacgaggactatatcccgccgctgctcgatgtggccgcctccagcgtgctggcg
gcctttcgccaagagttgcaaggcttgttgcaccagcgcggcgaggccctggcgggaagg
gtggtggcctcaggggccggcggtgcttcggagatcgccgactttctactgctgcaactg
gtcaatcgcgccgagcccttgctcagccacctggcccgcttgagtcccttgcacccgcag
gacttctatcgcgaagcggtctgcctggcaggggagttcgccaccttttccgcggccggg
cgtcgtcccagcgattacccggcctatgcccacgacgacctggcgagcagcttcgccccg
gtgatgcatgacctgcggcaagccttgtcgatggtcatcgatacccgcgccacgccgatt
cccatcgtcgagaaatcctacggcgtgcatgtggcgatgctggccgacaagagcctgctg
gaaatggccagcttcatcctggtggtgcgggccgacgtgccggccgaaaccctgcgcacc
catttcccccagcaggccaagatcggctcggtggaacacatccgcgacctggtcaatctg
cagttgccaggcattgccttgctgtccatgcccgtggcgccgcggcagattccctatcac
gccggttcgagctatttcgaactggaccgtggcagcgagcactggaaacagttgacccac
tcaggtggtttcgcctttcacatcgccggccagttcccgggcctgaacctggccttctgg
gccatccgaggatag
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