Pseudomonas chlororaphis subsp. piscium: C4K32_3775
Help
Entry
C4K32_3775 CDS
T09060
Name
(GenBank) Bacteriocin/lantibiotic efflux ABC transporter, permease/ATP-binding protein
KO
K12530
ATP-binding cassette, subfamily B, bacterial RtxB
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Pathway
pchp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C4K32_3775
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pchp02000
]
C4K32_3775
02044 Secretion system [BR:
pchp02044
]
C4K32_3775
Transporters [BR:
pchp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
C4K32_3775
Secretion system [BR:
pchp02044
]
Type I secretion system
RTX toxin transporter
C4K32_3775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
AAA_29
AAA_18
ABC_ATPase
DUF87
AAA_5
RsgA_GTPase
AAA_30
AAA_21
P-loop_TraG
Rad17
Motif
Other DBs
NCBI-ProteinID:
AZC70434
LinkDB
All DBs
Position
complement(4185906..4188071)
Genome browser
AA seq
721 aa
AA seq
DB search
MSANPAIPPQPAPVECPAMAELSATAAIHSALACCQLLLQLTQERAPQAADPGDERDLRR
ALKDYARGAGVELRLERLALARLTSKMLPLVWRDRSGAFILLARLSDAQALVQRPAAHTP
DVLDRAQLTEEWSGEVIRLRQGGLRFDLSWFVPELLRHRRILGEVLLCSLLLQVLALATP
LFFQAVMDKVMVHRALSTLDVLVMTLVVVGLFEVLLKGLREYLSAHTANRIDIGLGVKLF
RHLLGLPLLYFKQRQVGAIITRVQELDSIREFLTGSLLTLCVDVAFTLVFFAVMAWISWP
LTLLVLLTLPLYVLLAWASTGPLEKRIERQFYSAARNTAFLNESVSSSETIKSLAVEPRM
QRRWEAQTAEMVEAGFASQTLGSAISQMVTLLQKVTAVAVICWGASKVIDLQMTIGQLIA
FNMMLSHVSQPLAKLIEVWQQFVRVRVSVDKLGDMLNLPVEQAEGDQRPAQALRGEVRIE
QVTFRYRPELELVLRGLDLHIAAGQTLGIVGPSGSGKSTLTRLLQKLYTPDAGRILIDGM
PLQQLQPAWLRSQIGVVLQENYLFNRSVRHNIALRHPTASLESVIAAARLAGAHDFILRL
PLGYDTVLAEAGSSLSGGQRQRIAIARALMGDPRILIFDEATSALDDESQALIQDNMARI
AEGRTVIIIAHRLSAVRHCQRIIALEQGRISESGSHQQLLANGGCYARLWALQQALRKEA
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccaatcccgcaatacccccgcagccagcccctgtcgaatgccccgccatggcg
gagctctccgccaccgctgccatccactcggccctggcctgttgccaactgctgctgcaa
ctgacccaggagcgcgcgccacaggccgccgacccgggagacgagcgcgacctgcgtcgg
gcgctcaaggactacgcccggggcgccggcgtcgagctgcgcctggagcgtctggcgctg
gcccggctgacctcgaagatgctgcccctggtctggcgcgaccgcagcggcgcttttatc
ctgctggcccggttgtccgacgcgcaggccctggtacagcgaccggcagcccataccccg
gatgtgctcgatcgcgcgcagttgaccgaggagtggagcggcgaggtgatacgcctgcgc
cagggcggcctgcgcttcgacctgtcctggttcgttccggaactgctgcgccaccggcgg
atactcggcgaagtgttgctgtgctcgttgctgctgcaagtgctggccctggcgaccccg
ttgttcttccaggcggtgatggacaaggtcatggtgcaccgggcgctgtcgaccctcgac
gtgctggtgatgaccctggtggtggtcggcctgttcgaggtgctgctcaagggcttgcgc
gaatacctctcggcgcacaccgccaatcgcatcgatatcggccttggggtcaagctgttc
cgccacctgcttggcctgccgctgctgtacttcaagcagcgccaggtaggcgcgatcatc
acccgggtgcaggagctggacagcatccgcgagttcctcaccggctccctgctgaccctg
tgcgtggatgtggccttcaccctggtgtttttcgcggtcatggcctggatctcctggccg
ctgacgctgctggtgctgctgaccctgccgctctatgtgctgctggcctgggccagcacc
gggccgctggagaaacgtatcgagcggcagttctacagcgccgcgcgcaacacggccttt
ctcaacgaaagcgtaagcagcagcgaaaccatcaagagcctggcggtggaaccgcgcatg
cagcggcgctgggaggcgcagacggcggagatggtcgaggccggttttgccagccagacc
ctgggcagcgcgatcagccagatggtcacgctgttgcagaaagtcacggcggtggcggtg
atttgctggggggcgagcaaggtcatcgacctgcagatgaccattggccagttgatcgcc
ttcaacatgatgctgtcccacgtcagccagcccctggccaagctgatcgaggtctggcag
cagttcgtccgggtgcgggtgtcggtggacaagctgggcgacatgctcaacctgccggtg
gagcaggccgagggggatcaacgcccggcacaggccctgcgtggcgaggtgcgcatcgag
caggtgacgttccgctatcgcccggaactggagctggtgctgcgcggcctggacctgcat
atcgccgccggccagaccctgggcatcgtcgggccgtccgggtcgggcaagagcacactg
actcgcctgctgcaaaaactctacaccccggacgccgggcgcatcctcattgacggcatg
ccgctgcagcagctgcagccagcctggttgcgcagccagatcggcgtggtgctgcaggaa
aactacctgttcaaccgcagcgtgcggcacaacatcgccctgcgccatccgacggcctcc
ctggaaagcgtgatcgccgcggcgcgcctggccggcgcccacgatttcatcctgcgcctg
ccgctgggctacgacacggtgctggccgaggccggcagctcgctgtccggtggccagcgg
caacgcatcgccattgcccgcgcgctgatgggcgacccgcggatcctgattttcgacgaa
gccaccagcgccctggacgacgaatcccaggcgctgatccaggacaacatggcgcgcatc
gccgagggccgcacggtgatcatcatcgcccaccgcctgtccgcggtccgccattgccaa
cgcatcatcgccctggagcaggggcgtatcagcgagtcgggcagccaccagcaactgctg
gccaacggcggctgttatgcgcgcttgtgggcgctgcaacaggcgctgcgcaaggaggcc
gaatga
DBGET
integrated database retrieval system
