Pseudomonas chlororaphis subsp. piscium: C4K32_4029
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Entry
C4K32_4029 CDS
T09060
Name
(GenBank) Methylcrotonyl-CoA carboxylase biotin-containing subunit
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Pathway
pchp00280
Valine, leucine and isoleucine degradation
pchp01100
Metabolic pathways
Module
pchp_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
C4K32_4029
Enzymes [BR:
pchp01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
C4K32_4029
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
BT_MCC_alpha
ATP-grasp
Biotin_lipoyl_2
HlyD_3
HlyD_D23
GARS_A
ATP-grasp_3
ATPgrasp_ST
ATP-grasp_4
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
AZC70687
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Position
4474348..4476294
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AA seq
648 aa
AA seq
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MSAPFLTTLLVANRGEIACRVMRTAKAMGLTTVAVHSATDRDARHSREADLRVDLGGSKA
ADSYLQIDKLIAAAKASGAQAIHPGYGFLSENAGFARAIEAAGLIFLGPPASAIDAMGSK
SAAKALMETAGVPLVPGYHGEAQDLETFRVAAERIGYPVLLKATAGGGGKGMKVVEDISQ
LAEALASAQREAQSSFGDSRMLVEKYVLKPRHVEIQVFADQHGNCLYLNERDCSIQRRHQ
KVVEEAPAPGLSAGQRKAMGEAAVRAAQAIGYVGAGTVEFLLDARGEFFFMEMNTRLQVE
HPVTEAITGLDLVAWQIRVAQGEALPITQDQVPLIGHAIEVRLYAEDPGNDFLPATGRLA
LYRESAAGPGRRVDSGVEEGDSVSPFYDPMLGKLIAWGENREQARLRLLGMLDEFAIGGL
KTNLAFLRRIIAHPAFAAAELDTGFIPRYQDQLLPPATALSDEFWQAAAQAFAQSQPDQL
RADDRHSPWAKASGLRIGLPRETVLHLDCEGQDRAVKLDPSNAAIALHGEQLSIEHKGLR
QQHRAIRQGDSLYLQWQGEMHRVTAYDPIAAVEASHSHHGGLTAPMNGSIVRVLVQAGQS
VEAGAQLVVLEAMKMEHSIRAPQAGVVKALYCQEGEMVSEGSALVELE
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcccctttcctgaccaccctgctggtggccaaccgcggcgagatcgcctgccgc
gtgatgcgcaccgccaaggccatgggcctgaccaccgtggccgtgcacagcgccaccgac
cgtgacgcccgccacagccgcgaagccgacctgcgcgtcgacctgggcggcagcaaggcc
gccgacagctacctgcagatcgacaaactgatcgccgccgccaaggccagcggcgcccag
gctattcaccccggctacggctttctttcggaaaacgccggcttcgcccgcgccatcgaa
gccgctggcctgatcttcctcggcccgccggcgtcggccatcgatgccatgggcagcaag
tcggcggccaaggcgctgatggaaaccgccggcgtgcctctggtccccggttatcacggt
gaagcccaggacctggaaaccttccgcgtcgccgccgaacgcatcggctacccggtgctg
ctcaaggccaccgccggcggtggcggcaagggcatgaaagtggtggaggacatcagccag
ctggccgaagccctggcctcggcccagcgggaagcccagtcgtccttcggcgactcgcgg
atgctggtggaaaagtacgtgctcaagccgcgccacgtggagatccaggtgttcgccgac
cagcacggcaactgcctgtacctcaacgaacgcgactgctcgatccagcggcgccaccag
aaagtcgtcgaagaggccccggcccccggcctgagcgccggacagcgcaaggccatgggc
gaagccgcggtacgcgcggcgcaggccataggttacgtcggcgccggcaccgtggagttc
ctgctggacgcccgcggcgaattcttcttcatggaaatgaacacccgcctgcaagtggag
cacccggtcactgaagccatcaccgggctggacctggtggcctggcagatccgcgtggcc
cagggcgaggcgctgccgatcacccaggaccaggtgccgctgatcgggcatgcgatcgaa
gtgcggctgtacgccgaggacccgggcaacgacttcctccctgccaccgggcgcctggcg
ctgtaccgcgaatcggcggcgggtcccggacggcgggtggacagcggcgtcgaggaaggc
gacagcgtgtcgccgttctacgacccgatgctcggcaagctgatcgcctggggcgagaac
cgcgagcaggcgcgtttgcgcctgctgggcatgctcgacgagttcgccattggtgggctg
aagaccaacctggcgttcctgcggcgcatcatcgcccacccggccttcgccgccgccgag
ctggataccggctttatcccgcgctatcaggatcagttgctgccaccggccaccgccctg
agcgacgagttctggcaagccgccgcccaggcgttcgcccagagccagccggaccagctg
cgtgccgacgaccgtcactccccctgggccaaggccagtggcctgcgcatcggcctgccg
cgggaaaccgtgctgcacctcgactgcgagggccaggaccgggcggtcaagctggaccca
agcaacgccgccattgccttgcacggcgagcagctgtcgatcgagcacaaggggttgcgc
cagcagcatcgggcgattcgccagggcgacagcctgtacctgcagtggcagggcgagatg
caccgcgtcacggcctatgacccgattgccgcggtggaggccagccacagtcatcatggc
ggcctgaccgcgcccatgaacggcagcatcgtgcgggtgctggtgcaggccgggcagagt
gtcgaagccggcgcgcaactggtggtcctggaagccatgaagatggaacacagcatccgc
gcaccgcaagccggggtggtcaaggcactgtattgccaggaaggcgagatggtcagtgag
ggaagtgccctggtggagctggaataa
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