Pseudomonas chlororaphis subsp. piscium: C4K32_4139
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Entry
C4K32_4139 CDS
T09060
Name
(GenBank) RTX toxin transporter, ATP-binding protein
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Pathway
pchp02010
ABC transporters
pchp03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4K32_4139
03070 Bacterial secretion system
C4K32_4139
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pchp02000
]
C4K32_4139
02044 Secretion system [BR:
pchp02044
]
C4K32_4139
Transporters [BR:
pchp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
C4K32_4139
Secretion system [BR:
pchp02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
C4K32_4139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_16
ABC_ATPase
AAA_22
AAA_18
AAA_29
MeaB
DUF87
PRK
AAA_30
AAA_21
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AZC70793
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All DBs
Position
complement(4606749..4608887)
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AA seq
712 aa
AA seq
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MSEQGRGAESPTPDTGLVCLVMLARFHSVAASAEQLAHEFAPENQPFTQRELLLAARKLG
LKAKSVNTSISRLERTPLPAIAADGDGTFFIIAKLDQGQALIQDPRADRPEVISFEALAA
RWTGELVLLRSEAGLPGETSRFDFTWFIPAIVKYRKLLGEVLLVSFALQLFALVTPLFFQ
VVMDKVLVHHGLTTLDVIAAGLLGIMLFESALSGLRSYVFAHTASRIDVELGSRLFRHLI
NLPLAYFQARRVGDSVARVRELENIRSFLTGNAITLLLDVLFSLVFILVMFYYSGWLTLV
VLLSLPLYVLVSLFVTPLLRARLQDSFTRGAENQAFLVETVNGIDTVKSMAVEPQAIRKW
DNQMAAYVAAGFKTQTLSTIANESVSLIGKLVTVATLWLGARLVIDGQLSVGELIAFNML
AGRVSGPIMRLAQLWTSFQQTGVSVQRLGDILNTRTELSQATRSALPPLRGQIEFDQVHF
RYRADGSEILRGINLQIAAGEVIGVVGRSGSGKSTLTRLLQRLYVPERGRVLVDGMDLAL
ADVSSLRRQIGVVLQDNMLFNRSIRENIALSDPGVPLETVMHAASMAGAHEFILELPEGY
DTMVGEHGTSLSGGQRQRIAIARALIGNPRILIFDEATSALDYESERIIQQNMQSICAGR
TVIIIAHRLSAVRDANRILVVDRGQIVEQGNHAELLAHQAGHYSRLHRMQQG
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacaaggaaggggcgccgagtcgcccacgccagacacgggcctggtctgtctg
gtgatgctggcccggtttcattcggtggcggcatccgccgagcaactggcccacgaattc
gctccagagaaccagccgttcacccagcgcgaactgctgctcgccgcccgcaagctgggg
ctcaaggccaagtcggtcaacacttccatctcccgcctggagcgtacgccattgccggcg
atcgcggccgatggcgacggcacattcttcatcattgccaagctcgaccaaggccaggcg
ctgatccaggacccgcgtgcggatcgtcctgaagtcatctccttcgaggccctggccgcg
cgctggaccggcgagctggtgctgctgcgttccgaggccgggttgccgggggaaacctcg
cggttcgatttcacctggttcattcccgccatcgtcaaataccgcaagttgctcggcgaa
gtgctgctggtgtcctttgccctgcagctgtttgccctggtgacgccgttgtttttccag
gtggtgatggacaaggtgctggtgcaccacgggctgaccaccctggatgtcatcgccgcg
gggttgctgggcatcatgctgttcgaatcggccttgagcggtttgcgcagctacgtgttc
gcccataccgccagccggatcgatgtggagctgggttcgcgcttgtttcgccatctgatc
aacctgccgctggcgtatttccaggcgcgccgggtcggcgattcggtggccagggtgcgc
gagctggagaacatccgcagcttcctgaccggcaacgccattaccttgttgctggacgtg
ctgttctcactggtgttcatcctggtgatgttctactacagcggctggctgaccctggtg
gtgctgttgtcgctgcccctgtacgtgctggtctcgctgtttgtcaccccgctgttgcgc
gcccggttacaggacagtttcacgcgcggcgcggagaaccaggcgttcctggtggagacg
gtgaacggcatcgacaccgtgaagtccatggccgtcgagccccaggcgatccgcaagtgg
gacaaccagatggccgcttatgtcgcggccgggttcaagacccagaccctgtccaccatc
gccaacgaaagcgtgtcgctgatcggcaaactggttactgtggcgacgctctggctgggc
gcgcggctggtgatcgacgggcagctttcggtgggcgaactgatcgccttcaacatgctg
gccggccgggtcagcggcccgatcatgcgcctggcgcagttgtggaccagcttccagcag
accggcgtttcggtgcagcgcctgggcgatatcctcaacacccgcaccgagctgtcccag
gccacccgcagcgccttgccgcccctcagggggcagatcgaattcgaccaggtgcatttc
cgttatcgcgccgacggttcggaaatcctgcgcgggatcaacctgcagatcgccgccggc
gaagtgatcggcgtggtggggcgttccggctcgggtaaaagcacgctgacccgcctgctc
cagcgcctgtatgtgcccgaacgcgggcgggtgctggtggacggcatggacctggcgctg
gcggacgtttcctcactgcggcggcagatcggcgtggtgttgcaggacaacatgctgttc
aaccgcagcatccgggaaaacatcgccctgagcgatccgggcgtgccgctggaaacagtg
atgcatgctgccagcatggccggggcccacgaattcatcctggagctgcccgaaggctac
gacaccatggttggggagcatggcacctcgctgtccggcggccagcggcaacgcatcgcc
atcgcccgggccctgatcggcaacccgcggatcctgattttcgacgaggccaccagtgcg
ctggactacgagtccgaacggatcatccagcagaacatgcaaagcatctgcgccgggcgc
acggtgatcatcatcgctcaccggttgtcggcggtacgcgatgccaaccgcatcctggtg
gtcgatcgcggacagatcgtcgagcagggcaaccatgccgaactgctggcgcaccaggcc
ggccactattcgcgcctgcaccgtatgcagcagggctga
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