Pseudomonas chlororaphis subsp. piscium: C4K32_4485
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Entry
C4K32_4485 CDS
T09060
Name
(GenBank) Integration host factor beta subunit
KO
K05788
integration host factor subunit beta
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pchp03032
]
C4K32_4485
03036 Chromosome and associated proteins [BR:
pchp03036
]
C4K32_4485
03400 DNA repair and recombination proteins [BR:
pchp03400
]
C4K32_4485
DNA replication proteins [BR:
pchp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
C4K32_4485
Chromosome and associated proteins [BR:
pchp03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
C4K32_4485
DNA repair and recombination proteins [BR:
pchp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
C4K32_4485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AZC71133
LinkDB
All DBs
Position
complement(5014611..5014904)
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AA seq
97 aa
AA seq
DB search
MTKSELIERIVTHQGLLSSKDVELAIKTMLEQMSQCLATGDRIEIRGFGSFSLHYRAPRV
GRNPKTGQSVSLDGKFVPHFKPGKELRDRVNEEEEGV
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtcggagttgatcgaacgaattgtcacccatcaagggctactctcatccaag
gatgtggagctggccatcaagaccatgcttgagcaaatgtcccaatgcctggcaaccgga
gatcgtattgagattcggggctttggcagcttctctctgcactaccgtgcgccgcgcgta
ggtcgcaatccgaagactggtcagtccgtcagtttggatggcaaattcgttccacatttc
aagccgggcaaagagcttcgggatcgtgtgaacgaggaagaggagggggtgtga
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integrated database retrieval system
