Pseudomonas chlororaphis subsp. piscium: C4K32_4784
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Entry
C4K32_4784 CDS
T09060
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Pathway
pchp00061
Fatty acid biosynthesis
pchp00071
Fatty acid degradation
pchp01100
Metabolic pathways
pchp01212
Fatty acid metabolism
pchp02024
Quorum sensing
pchp04146
Peroxisome
Module
pchp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
C4K32_4784
00071 Fatty acid degradation
C4K32_4784
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
C4K32_4784
09145 Cellular community - prokaryotes
02024 Quorum sensing
C4K32_4784
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pchp01004
]
C4K32_4784
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pchp04147
]
C4K32_4784
Enzymes [BR:
pchp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
C4K32_4784
Lipid biosynthesis proteins [BR:
pchp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
C4K32_4784
Exosome [BR:
pchp04147
]
Exosomal proteins
Exosomal proteins of breast milk
C4K32_4784
Exosomal proteins of breast cancer cells
C4K32_4784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF599
Motif
Other DBs
NCBI-ProteinID:
AZC71424
LinkDB
All DBs
Position
complement(5309022..5310710)
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AA seq
562 aa
AA seq
DB search
MIQDFWKDKYPAGIAADINPDEYPNIQAVLKQSCQRFANKPAFSNLGKTLTYGELYELSG
AFAAYLQQHTDLQPGDRIAVQLPNVLQYPVAVFGAIRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEAVVPKTSVKHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYH
LPKAVKFNDVLSQGHGQPVKDASPASSDVAVLQYTGGTTGVAKGAMLTHRNLVSNMLQCK
ALMGSNLNEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELSKWK
FSGFVGLNTLFVALCNNEAFRKLDFSALKVTLSGGMALQLAAAERWKDVTGCPICEGYGM
TETSPVATVNPIQNIQIGTIGIPVPSTLCRIVDDAGVELPLGETGELCVKGPQVMKGYWQ
RQDATDEVMSDGWLKTGDIALIQPNGYIRIVDRKKDMILVSGFNVYPNELEDVLAALPGV
LQCAAIGVPDEKSGESIKIFIVAKPGVTLTKEQVMEHMRANVTGYKVPKAVEFRDALPTT
NVGKILRRELRDEELKKLGVKK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgatccaagacttttggaaggataagtacccagctgggattgctgccgatatcaatcca
gacgagtatccgaatattcaggcggtgttgaagcagtcctgccaacgttttgccaacaaa
ccggcctttagcaacctcggcaagacactcacctacggtgagttgtacgaactgtccggt
gcttttgccgcgtacctgcaacagcataccgatttgcaacccggcgatcgaatcgccgtg
caactgcccaacgtcctgcagtacccggtcgcggtattcggcgccatccgcgccggcctg
atcgtggtcaacaccaacccgctgtacaccgcgcgggaaatggaacaccagttcaacgac
tccggcgccaaggccctggtctgcctggccaacatggcgcacctggccgaagccgtggtg
cccaagaccagcgtcaagcatgtgatcgtcaccgaagtggcggacctgctgccaccgctc
aagcgcctgctgatcaacagcgtcatcaagtacgtgaagaagatggtgccggcctatcac
ctgcccaaggccgtcaagttcaacgacgtgctgagccagggccatggccagccggtcaag
gacgccagcccggccagcagcgatgtcgccgtgctgcaatacaccggtggcaccaccggc
gtggccaagggcgcgatgctgacccaccgcaacctggtgtcgaacatgctgcagtgcaag
gcgctgatgggctccaacctcaatgaaggttgcgagatcctgatcaccccgctgccgctg
taccacatctatgccttcacctttcattgcatggcgatgatgctgatcggcaaccacaac
atcctgatcagcaacccgcgcgacctgccggcgatggtcaaggaactgtcgaagtggaag
ttcagcggtttcgtcggcctcaacacgttgttcgtggccctgtgcaacaacgaagccttc
cgcaagctggatttctcggcgctgaaagtcaccctgtccggcggtatggcgctgcaactg
gcggcggctgagcgttggaaagacgtgaccggttgcccgatctgcgaaggttacggcatg
accgaaaccagcccggtggccactgtcaacccgatccagaacatccagatcggcaccatc
ggcatcccggtaccctcgaccctgtgccggatcgtcgacgacgccggcgtcgaactgccg
ctgggcgagaccggcgagctctgcgtcaagggtccgcaggtcatgaagggttactggcag
cgccaggacgccaccgatgaggtgatgagcgatggctggctgaagaccggcgatatcgcg
ctgatccagcccaatggctatatccgcatcgtcgatcgcaagaaagacatgatcctggtc
tccggcttcaacgtttatccgaacgagctggaagacgtgctggcggccctgccgggcgtg
ttgcagtgcgcggccatcggcgtgccggacgagaagtcgggcgagtcgatcaagatcttc
atcgtcgccaagccgggcgtgaccctgaccaaggagcaggtgatggagcacatgcgcgcc
aacgtcaccggctacaaggtgcccaaggccgtcgagttccgcgatgcgctgccgaccacc
aacgtcggcaagatcctgcgtcgcgaactgcgcgacgaagagctgaagaagctgggcgtg
aagaagtaa
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