Pseudomonas chlororaphis subsp. piscium: C4K32_4864
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Entry
C4K32_4864 CDS
T09060
Name
(GenBank) Crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Pathway
pchp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C4K32_4864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchp03400
]
C4K32_4864
Enzymes [BR:
pchp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
C4K32_4864
DNA repair and recombination proteins [BR:
pchp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C4K32_4864
RecFOR pathway proteins
C4K32_4864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF3882
Motif
Other DBs
NCBI-ProteinID:
AZC71503
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All DBs
Position
complement(5391700..5392224)
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AA seq
174 aa
AA seq
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MTLILGIDPGSRITGYGVVRDTGRGCVYVASGCIRTGAGELHERLQIVYRGVREVIQTYG
PVTMGIEKVFMARNADSALKLGQARGAAIVAGAEESLEIAEYTATQVKQAVAGTGGANKE
QVQMMVMHLLKLTSKPQIDASDALAIAICHAHTRSSLLPHGLGTARSRGGRLRL
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgactcttattcttggtatcgacccgggttcgcgcatcaccggttacggcgtggtacgt
gataccgggcgtggctgcgtgtacgtggcttcgggctgcattcgaaccggcgccggcgag
ctgcatgagcggctgcaaattgtctatcgcggggttcgtgaggtcattcagacctacggt
ccggtgaccatgggcattgaaaaggtgttcatggcgcgtaatgccgactcggccctgaaa
ctgggccaggcccgtggcgcggcgatcgtggcgggggccgaggaaagcctggaaatcgcc
gaatacaccgctactcaagtcaagcaggcggtggcgggcactggcggggccaacaaggaa
caggtgcaaatgatggtcatgcacttgctcaagttgaccagcaagccgcagatcgacgcc
tcggatgccctggcgattgccatctgccatgcccatacccgttccagcctgctgcctcat
ggcctggggaccgcacgcagtcgtggcggtcgcctgcgtctctga
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