Pseudomonas chlororaphis subsp. piscium: C4K32_4977
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Entry
C4K32_4977 CDS
T09060
Name
(GenBank) Glycerol-3-phosphate regulon repressor GlpR
KO
K02444
DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pchp03000
]
C4K32_4977
Transcription factors [BR:
pchp03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
C4K32_4977
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_PafC
HTH_20
HTH_Crp_2
Sigma70_r4_2
MarR
Put_DNA-bind_N
GntR
Sigma70_r4
MarR_2
HTH_Mga
HTH_28
TFIIE_alpha
Motif
Other DBs
NCBI-ProteinID:
AZC71616
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Position
5507847..5508602
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AA seq
251 aa
AA seq
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MNLPPRQQQILELVRERGYVSIEEMAQLFVVTPQTIRRDINQLAEVNLLRRYHGGAAYDS
SVENTAYAMRADQMRDEKQRIGEAIAAQIPDHASLFINIGTTTESIARALLNHSHLKIIT
NNLHVASMLSAKDDFDVLLTGGNVRRDGGVVGQASVDFINQFKVDFALVGISGIDEDGSL
LDFDYQEVRVSQAIIANARQVILAADSSKFGRNAMIRLGPISLIDCLVTDQQPVPALTQL
LQQHKIRLEVV
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgcctccccgtcagcagcaaatcctcgagctggtccgcgaacgcggctatgtc
agcatcgaggagatggcccagctgttcgtcgttacaccgcaaaccatccgccgcgatatc
aaccaactggcggaagtgaacctgttgcgtcgctaccatggcggcgcagcctacgactcc
agtgtcgaaaacaccgcctacgccatgcgcgccgatcagatgcgcgatgagaaacaacgc
atcggcgaagccatcgccgcgcagattcccgatcacgcctcgctgttcatcaacatcggc
accaccaccgaatccattgcccgggcgctgctcaatcacagccacctgaagatcatcacc
aacaacctgcacgtggcctccatgctcagcgccaaggacgacttcgacgtgctgttgacc
ggcggcaatgtgcgccgcgatggcggcgtagttggccaggccagtgtcgacttcatcaac
cagttcaaggtcgactttgccctggtcggcatcagcggtatcgacgaggacggcagcctg
ctggacttcgactaccaggaagtgcgggtttcccaggcgatcatcgccaatgcccgccag
gtgatcctggccgccgactccagcaaattcgggcgcaatgccatgatccgcctcggcccc
atcagcctgatcgattgcctggtcaccgaccagcagccggttccggcgctgacccagttg
ctgcagcagcacaagattcgcctggaagtcgtctga
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