KEGG   Pseudomonas chlororaphis subsp. piscium: C4K32_5271
Entry
C4K32_5271        CDS       T09060                                 
Name
(GenBank) Helix-turn-helix motif
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
pchp  Pseudomonas chlororaphis subsp. piscium
Brite
KEGG Orthology (KO) [BR:pchp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pchp03000]
    C4K32_5271
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pchp02048]
    C4K32_5271
Transcription factors [BR:pchp03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    C4K32_5271
Prokaryotic defense system [BR:pchp02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    C4K32_5271
SSDB
Motif
Pfam: HTH_3 HTH_31
Other DBs
NCBI-ProteinID: AZC71907
LinkDB
Position
5804112..5804483
AA seq 123 aa
MQIRPIHTDQDYRAALKQVSVLFDNEPEPGTAQGDYFDVMITLIEAYEAKQFPVDLPNPI
DAIKFRMEQSGLSAADLAPAIGRTNRVYEVLNGKRALTLPMIWKLHQLFGIPAESLIKPV
KSV
NT seq 372 nt   +upstreamnt  +downstreamnt
atgcagattcgccccattcacaccgatcaggactaccgcgcggcactcaagcaggtgtcc
gtactgttcgataacgagccagagcccggcaccgcgcaaggcgattacttcgacgtgatg
atcaccctgatcgaagcctatgaagccaaacagttcccggtcgacctgcccaacccgatc
gatgccatcaagttccgcatggagcaatcgggcctctcggccgccgacctggccccggcc
atcggccgaaccaaccgggtctacgaagtactcaacggcaaacgcgccctgaccctgccg
atgatctggaagctgcaccaactgttcggcatccccgccgagagcctgatcaagccggtg
aagtcggtctga

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