Pseudomonas chlororaphis subsp. piscium: C4K32_5275
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Entry
C4K32_5275 CDS
T09060
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Pathway
pchp00470
D-Amino acid metabolism
pchp00550
Peptidoglycan biosynthesis
pchp01100
Metabolic pathways
pchp01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C4K32_5275
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C4K32_5275
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
C4K32_5275
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pchp01011
]
C4K32_5275
Enzymes [BR:
pchp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
C4K32_5275
Peptidoglycan biosynthesis and degradation proteins [BR:
pchp01011
]
Precursor biosynthesis
Amino acid ligase
C4K32_5275
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_4
CPSase_L_D2
RimK
Motif
Other DBs
NCBI-ProteinID:
AZC71911
LinkDB
All DBs
Position
complement(5806767..5807861)
Genome browser
AA seq
364 aa
AA seq
DB search
MSKLRVGIIFGGRSAEHEVSLQSARNIVDALDRERFEPVLIGIDKNGHWHLNDTSNFLIN
QENPALIALNQSNRELAVVPGKASQQLVETSSQELLGHVDVIFPIVHGTLGEDGCLQGLL
RMADLPFVGSDVLGSAVCMDKDISKRLLRDAGLAVTPFITLNRATAARTDFAQAQSKLGL
PMFVKPANQGSSVGVSKVTSEAQYHAAIELALGFDEKVLVESAVSGREIECAVLGNDQPI
ASGCGEIVVGSGFYSYDSKYIDDQAAQVVVPADLSEEVSERIRTLAVEAFQVLGCSGLAR
VDVFLTQGGEVLINEINSLPGFTRISMYPKLWQAAGMTYSELVSRLIELALERHAARQAL
KISR
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagctgcgggtcgggattatttttggtggccgttcggccgaacacgaagtgtcg
ctgcagtcggcgcgcaacatcgtcgatgcgctggatcgcgagcgcttcgaaccggtgttg
atcggcatcgacaagaacggccactggcacctcaacgacacctcgaacttcctgatcaac
caggaaaacccggcgctgatcgccctcaaccagtccaatcgcgaactggcggtggtgccg
ggcaaggccagccagcaactggtggaaacctccagccaggaactgctgggccacgtcgat
gtgattttccccatcgtccacggcacccttggcgaagacggctgcctgcaaggcctgctg
cgcatggccgacctgccgttcgtgggctccgacgtgctgggttcggcggtgtgcatggac
aaggacatcagcaagcgcctgctgcgcgacgccggcctggcggtgacgcccttcatcacc
ctgaaccgtgccaccgcggcgcgcaccgactttgcccaggcgcaaagcaaactgggcctg
ccgatgttcgtcaaaccggcgaaccagggctcgtccgtgggcgtgagcaaggtcaccagc
gaagcgcaataccacgctgccatcgagttggcgctgggcttcgatgagaaggtcttggtg
gagtcggcggtcagtggtcgcgagatcgaatgcgcggtgctgggtaatgatcagccgatc
gccagcggttgcggggaaatcgtcgttggtagcggcttttattcctatgacagcaaatac
atcgacgaccaggcggcccaggtggtggtgccggcggatctcagtgaggaagtcagcgag
cgcattcgcaccctggccgtcgaggcgttccaggtgctgggctgttcggggctggcgcgg
gtcgatgtgttcctgacccagggcggcgaagtgctgatcaacgagatcaattcgctgccc
ggtttcacccgcatcagcatgtacccgaagctgtggcaggccgcgggcatgacctacagc
gaactggtcagccgcttgatcgaactggcgctggagcggcatgcggcgcgccaggcactg
aaaatcagccgctga
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