Pseudomonas chlororaphis subsp. piscium: C4K32_5346
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Entry
C4K32_5346 CDS
T09060
Name
(GenBank) Poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Pathway
pchp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C4K32_5346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchp03019
]
C4K32_5346
Enzymes [BR:
pchp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
C4K32_5346
Messenger RNA biogenesis [BR:
pchp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
C4K32_5346
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AZC71977
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All DBs
Position
5883333..5884736
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AA seq
467 aa
AA seq
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MLKKLFQSFRSPLRRTQHKRSTPEVLNSSQHSLQRAQFSRYAVNIVERLQNAGYQAYLVG
GCVRDMLLNITPKDFDVATSATPEQVRAEFRNARIIGRRFKLVHIHFGREIIEVATFRAN
HPQNDEEEDSNQSSRNESGRILRDNVYGTLEEDAQRRDFTINALYYDPVSERILDYANGV
HDIRNHLIRLIGDPRQRYQEDPVRMLRAVRFAAKLDFGIEKHTAAPIRDLAPMLREIPSA
RLFEEVLKLFLSGHAADTFEMLVDLQLFDPLFPASAEALEYNPTYTHTLISEALINTDLR
IKQNKPVTPAFLFAALLWPALPARVLRLQERGMPPIPAMQEAAHELISEQCQRIAIPKRF
TMPIREIWDMQERLPRRSGKRADQLLDNPRFRAGYDFLLLRESAGEQTDGLGEWWTDYQD
ANEAGRRDMIRDLSGKDDAGTGPRKRRRSSGAKRKRATAGAPSASGE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagttgttccagtcattccgttctcccttgcgtcgtacgcaacacaaacgc
agcacgcctgaagtgctcaacagcagccaacactcgctgcaacgcgcccagttcagccgt
tatgcggtgaacatcgtcgaacgcctgcagaacgccggctaccaggcctacctggtcggc
ggctgcgtgcgcgacatgctgctcaatatcacccccaaggatttcgacgtcgccaccagc
gccacgccggaacaggtgcgggccgaattccgcaacgcccggatcatcggccgtcggttc
aagctggtgcatatccacttcggccgcgaaatcatcgaggtcgcgaccttccgcgccaat
cacccgcaaaacgatgaagaggaagacagcaaccaatcctcgcgcaacgaaagcgggcgc
atcctgcgcgacaacgtgtacggcaccctcgaagaggacgcccagcgccgcgacttcacc
atcaatgccctgtattacgatccggtcagcgaacgcatcctcgattacgccaacggcgtg
cacgacattcgcaatcacctgatccgtctgatcggcgatccgcgccagcgctaccaggaa
gatccggtacgcatgctgcgggccgtgcgcttcgcggcgaagctggatttcggcatcgag
aaacacactgccgcgccgatccgcgacctggcccccatgctgcgggaaatcccctcggcc
cgcctgttcgaggaagtgctcaagctgttcctgtccggccatgccgccgacaccttcgag
atgctggtcgacctgcaactgttcgatccgctgttcccggccagcgccgaggcgctggag
tacaacccgacctacacccacacgctgatcagcgaagccctgatcaataccgacctgcgc
atcaagcagaacaagccggtaaccccggctttcctgttcgccgcgctgctgtggccggcc
ctgccggctcgcgtgctgcgccttcaggaacgcggcatgccgccgattccggcgatgcag
gaagccgctcacgaattgatcagcgaacagtgccagcgcatcgccattccaaaacgcttc
accatgccgatccgcgaaatctgggacatgcaggaacgcctgcctcgtcgcagcggcaag
cgcgccgaccagttgctggacaatccgcggttccgcgccggttatgacttcctgctgctg
cgcgaaagcgccggcgaacagaccgatggcctgggcgagtggtggaccgactatcaggac
gccaacgaagccgggcgccgcgacatgattcgcgacctgagcggcaaggacgacgccggc
acaggtccgcgcaagcgtcggcgcagcagtggcgccaaacgcaaacgcgccaccgccggc
gcaccgagcgcttccggcgaataa
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