Pseudomonas chlororaphis subsp. piscium: C4K32_5394
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Entry
C4K32_5394 CDS
T09060
Name
(GenBank) Type IV fimbriae expression regulatory protein PilR
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Pathway
pchp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C4K32_5394
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pchp02022
]
C4K32_5394
02035 Bacterial motility proteins [BR:
pchp02035
]
C4K32_5394
Two-component system [BR:
pchp02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
C4K32_5394
Bacterial motility proteins [BR:
pchp02035
]
Pilus system
Twitching motility proteins
C4K32_5394
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
Mg_chelatase
AAA_5
HTH_50
HTH_30
AAA_16
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AZC72021
LinkDB
All DBs
Position
5934010..5935389
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AA seq
459 aa
AA seq
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MAGALAPLSLTDEAASGMSPRQKVLIVDDDPGVREYLEISLGRMQRHTRSARTLGEARHW
LAREGFDLCLSDLHLPDGTGLELLEHIQHRRLRMPLAILSTCARQETAVQALKAGAIDFL
SKPVALSRLHELLNSTLPGSTPANPATGPLLGDSAAMHKLRGQIGKLAQSQASIYISGES
GSGKELVARAIHDQGPRASHAFVPVNCGAIPPELMESEFFGHRKGSFSGAIEDKPGLFQA
AHGGTLFLDEVADLPLAMQVKLLRALQEKAVRCVGGQQEVQVDARILCATHKALQAEVRA
GRFRQDLYYRLNVIELPVPPLRARKDDIEPLATAILERLAQGDGQPLARLQPSALLALQG
YDFPGNVRELENLLERAHTLCENRRIEARDLRLTSHSAHPAIAPGAAQVIDLEDYLQEVE
RRLILQALEHTRWNRTAAAQRLSLSFRSMRYRLKKLGLD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgctctcgcacctctttcgctcacggatgaagcagcaagcggcatgagccca
cggcaaaaagtcctgatcgtcgatgacgatccaggcgttcgcgaatatctggaaatcagc
cttggccggatgcaacgccatacccgcagcgcccgcaccctgggcgaagcgcgtcactgg
ctggcccgggaaggcttcgacctgtgcctgagcgacctgcatttgcccgacggcactggg
ctggaattactcgagcatatccagcaccgtcggctgcgaatgccgttggcgatactcagc
acctgcgcccgccaggaaaccgcggtccaggccctgaaggccggtgccatcgacttcctg
agcaaacccgtggccctgtctcgcttgcacgaactgctaaacagcaccctacccggatcg
acaccagcgaaccctgctaccggccccttgctcggcgattcggccgccatgcacaaactg
cgcggacagatcggcaaactggcccagagccaggcatcgatctatatcagcggtgagtcc
ggcagcggcaaggaattggtcgcccgtgccatccacgaccagggaccacgagccagccac
gccttcgtgccggtcaactgcggggccattccgccggaactgatggagagcgagtttttc
ggacatcgcaaaggcagcttcagcggcgctatcgaagacaagcccggcctgttccaggca
gcgcacggcggcaccctgtttctcgatgaggtggccgacctgccgctggcgatgcaggtc
aaattgctccgcgcgctccaggagaaggccgtgcgctgtgtcggcgggcagcaggaagtc
caggtcgatgcgcgcattctctgcgccacccacaaggcattgcaggcggaagtgcgtgcc
gggcgttttcgtcaggacctctactaccgcctgaacgtgatcgagttgccggtgccaccg
ctacgggcgcgcaaggacgacatcgagcccttggccacagccatcctcgagcggctggcg
cagggcgacggccaaccgctggcacggcttcagccaagcgcactgttggcgctccagggc
tacgactttcccggcaacgtgcgcgaactggagaacctgctcgaacgggcccataccctg
tgcgagaaccgccggatcgaagcgcgcgatctgcgcctgacgtcacacagcgcccatccg
gccatcgcgcccggagcggcacaggtgatcgaccttgaagattatctgcaagaagtcgag
cgccggctgatcctccaggccctggagcacacccgctggaaccgcacggcggcggcccag
cgtttgagtctgtcgtttcgttcgatgcgctacaggctgaagaaactcggcctggattag
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